RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ZNF28P17035 718 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 HLA-GP17693 338 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 CCNA2P20248 432 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 CRABP1P29762 137 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 PSMD7P51665 324 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 DGKQP52824 942 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 SPIBQ01892 262 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 FAM189A2Q15884 450 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 TRMT12Q53H54 448 aaKnown RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 RTL6Q6ICC9 239 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 ISLR2Q6UXK2 745 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 RAB11FIP2Q7L804 512 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 ABHD12BQ7Z5M8 362 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 SPARTQ8N0X7 666 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 FAM86B1Q8N7N1 296 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 ASCC1Q8N9N2 400 aaKnown RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 SLC16A11Q8NCK7 471 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF540Q8NDQ6 660 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 OR10G2Q8NGC3 310 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 SLC25A28Q96A46 364 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 PERPQ96FX8 193 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 LPAR4Q99677 370 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 ARRDC1-AS1Q9H2J1 176 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 AKIP1Q9NQ31 210 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF629Q9UEG4 869 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 DTX4Q9Y2E6 619 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 RPH3AQ9Y2J0 694 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 TPRKBQ9Y3C4 175 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 KCNE3Q9Y6H6 103 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 TMEM247A6NEH6 219 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 BLOC1S5-TXNDC5H3BN57 136 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 SGK494L7N484 410 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 M0R082 166 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 CRYABP02511 175 aaKnown RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 QDPRP09417 244 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 LMO1P25800 156 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 CDH11P55287 796 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 TPD52P55327 224 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 CLDN15P56746 228 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 TMPRSS3P57727 454 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 VSX2P58304 361 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 SEC61A1P61619 476 aaKnown RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 GRB2P62993 217 aaKnown RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 RPP30P78346 268 aaKnown RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 ATPAF1Q5TC12 328 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 GPR107Q5VW38 600 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 KLHL24Q6TFL4 600 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 PRSS41Q7RTY9 318 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 MRGPRGQ86SM5 289 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 ZDHHC13Q8IUH4 622 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 DMRTC2Q8IXT2 367 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 FRMD1Q8N878 549 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF417Q8TAU3 575 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 TM9SF4Q92544 642 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 KTI12Q96EK9 354 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 MRPS24Q96EL2 167 aaKnown RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 SGTBQ96EQ0 304 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 NODALQ96S42 347 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 ABHD1Q96SE0 405 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF587Q96SQ5 575 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 NAA11Q9BSU3 229 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 KATNB1Q9BVA0 655 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 MND1Q9BWT6 205 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 TP63Q9H3D4 680 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 REEP1Q9H902 201 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 SEC61A2Q9H9S3 476 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 ACOT13Q9NPJ3 140 aa4.32□□□□□ -1.72
SCAF11-212ENST00000549162 NDRG2Q9UN36 371 aaKnown RBP4.32□□□□□ -1.72
SCAF11-212ENST00000549162 MEGF11A6BM72 1044 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 MFSD2BA6NFX1 497 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 F2RL2O00254 374 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 GPR171O14626 319 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 RAB36O95755 333 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 AMY1AP04745 511 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 DNA2P51530 1060 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 CDH12P55289 794 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 DHODHQ02127 395 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 SYT16Q17RD7 645 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 PDSS1Q5T2R2 415 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 RPL22L1Q6P5R6 122 aaKnown RBP4.31□□□□□ -1.72
SCAF11-212ENST00000549162 RPTNQ6XPR3 784 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 TMPPEQ6ZT21 453 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 CALHM1Q8IU99 346 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 FAM98AQ8NCA5 519 aaKnown RBP4.31□□□□□ -1.72
SCAF11-212ENST00000549162 SDCCAG3Q96C92 435 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 MED8Q96G25 268 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 OR2M2Q96R28 347 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 OR6C1Q96RD1 312 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 MTERF1Q99551 399 aaKnown RBP4.31□□□□□ -1.72
SCAF11-212ENST00000549162 SLC29A1Q99808 456 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 NXF5Q9H1B4 397 aaKnown RBP4.31□□□□□ -1.72
SCAF11-212ENST00000549162 ESRP2Q9H6T0 727 aaKnown RBP4.31□□□□□ -1.72
SCAF11-212ENST00000549162 HEYLQ9NQ87 328 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-212ENST00000549162 TBCCD1Q9NVR7 557 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 FOXJ2Q9P0K8 574 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 ARMCX1Q9P291 453 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 COA3Q9Y2R0 106 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-212ENST00000549162 TMEM82A0PJX8 343 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF670-ZNF695F2Z2N8 137 aa4.31□□□□□ -1.72
SCAF11-212ENST00000549162 PRKNO60260 465 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms