RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 IFT27Q9BW83 186 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 RSPO3Q9BXY4 272 aaPredicted RBP1.51□□□□□ -2.17
LGR5-205ENST00000549015 ALOXE3Q9BYJ1 711 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 NMNAT2Q9BZQ4 307 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 OR2B2Q9GZK3 357 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 ACTR6Q9GZN1 396 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 LAT2Q9GZY6 243 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 SLITRK2Q9H156 845 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 SLC26A1Q9H2B4 701 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 ZCCHC4Q9H5U6 513 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 EGLN3Q9H6Z9 239 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 PPP1R3EQ9H7J1 279 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 NIPAL2Q9H841 368 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 MOB1AQ9H8S9 216 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 WDR54Q9H977 334 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 SYNPO2LQ9H987 977 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 MARCH7Q9H992 704 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 MCCC2Q9HCC0 563 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 FAM60AQ9NP50 221 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 AMBNQ9NP70 447 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 MMP25Q9NPA2 562 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 EXOSC4Q9NPD3 245 aaKnown RBP1.51□□□□□ -2.17
LGR5-205ENST00000549015 NRIP3Q9NQ35 241 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 MEPEQ9NQ76 525 aaPredicted RBP1.51□□□□□ -2.17
LGR5-205ENST00000549015 DIABLOQ9NR28 239 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 SLC17A5Q9NRA2 495 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 ABCB10Q9NRK6 738 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 PLSCR4Q9NRQ2 329 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 CYSLTR2Q9NS75 346 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 SNTG1Q9NSN8 517 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 CUTCQ9NTM9 273 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 RBFOX1Q9NWB1 397 aaKnown RBP1.51□□□□□ -2.17
LGR5-205ENST00000549015 SOHLH2Q9NX45 425 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 MRPL39Q9NYK5 338 aaKnown RBP1.51□□□□□ -2.17
LGR5-205ENST00000549015 TAS2R16Q9NYV7 291 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 TAS2R8Q9NYW2 309 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 PLA2G3Q9NZ20 509 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 FLRT3Q9NZU0 649 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 FAM30AQ9NZY2 134 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 PLEKHB1Q9UF11 243 aaPredicted RBP1.51□□□□□ -2.17
LGR5-205ENST00000549015 CLEC2DQ9UHP7 191 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 ZNF107Q9UII5 783 aaPredicted RBP1.51□□□□□ -2.17
LGR5-205ENST00000549015 KCNE5Q9UJ90 142 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 KCNG2Q9UJ96 466 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 ZNF221Q9UK13 617 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 ERVK-19Q9WJR5 959 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 NTNG1Q9Y2I2 539 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 MRPS2Q9Y399 296 aaKnown RBP1.51□□□□□ -2.17
LGR5-205ENST00000549015 OR10H1Q9Y4A9 318 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 FKBP7Q9Y680 259 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 KCNE3Q9Y6H6 103 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 CLCA3PQ9Y6N3 262 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 RNF215Q9Y6U7 377 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 TRANK1O15050 2925 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 KIAA0100Q14667 2235 aaKnown RBP1.51□□□□□ -2.17
LGR5-205ENST00000549015 DOCK8Q8NF50 2099 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 PIKFYVEQ9Y2I7 2098 aa1.51□□□□□ -2.17
LGR5-205ENST00000549015 LRP4O75096 1905 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 TICRRQ7Z2Z1 1910 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 PLXND1Q9Y4D7 1925 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 COL5A1P20908 1838 aaPredicted RBP1.5□□□□□ -2.17
LGR5-205ENST00000549015 IGKV1D-42A0A075B6H8 117 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 TRAV27A0A087WT01 109 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 A0A087WZY1 265 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 LOC102723996A0A087X1L8 192 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 TNFSF12-TNFSF13A0A0A6YY99 330 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 IGHV5-51A0A0C4DH38 117 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 TEX13CA0A0J9YWL9 993 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 TRBV5-5A0A0J9YX44 114 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 CENPVL1A0A0U1RR11 272 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 TEX51A0A1B0GUA7 166 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 LOC102725191A0A1B0GVB3 256 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 A0A1B0GVI7 797 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 FAM240BA0A1B0GVZ2 78 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 A0A1W2PNV4 684 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 A0A1W2PQ09 198 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 A0A1W2PQL4 384 aaPredicted RBP1.5□□□□□ -2.17
LGR5-205ENST00000549015 A0A1W2PS29 197 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 FAM172BPA6NC97 362 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 TRABD2BA6NFA1 517 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 ANKUB1A6NFN9 424 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 FAM90A20PA6NIJ5 464 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 A6NIZ1 184 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 MBD3L5A6NJ08 208 aaPredicted RBP1.5□□□□□ -2.17
LGR5-205ENST00000549015 LIPT2A6NK58 231 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 VSTM2BA6NLU5 285 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 A8MVM7 634 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 FAM25AB3EWG3 89 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 FAM25CB3EWG5 89 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 FAM25GB3EWG6 89 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 LRRN3E7EW58 273 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 H3BQ06 376 aaPredicted RBP1.5□□□□□ -2.17
LGR5-205ENST00000549015 M0R129 80 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 AIPO00170 330 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 PSMD9O00233 223 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 RFXAPO00287 272 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 SOCS6O14544 535 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 CTDSP2O14595 271 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 XKRYO14609 159 aa1.5□□□□□ -2.17
LGR5-205ENST00000549015 GPR171O14626 319 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms