RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 PGGHGQ32M88 737 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 C3orf36Q3SXR2 165 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 DNAL1Q4LDG9 190 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 B3GLCTQ6Y288 498 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 MDP1Q86V88 176 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 TMEM171Q8WVE6 324 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 TSPAN32Q96QS1 320 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 BTBD10Q9BSF8 475 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 MOV10Q9HCE1 1003 aaKnown RBP16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 KRCC1Q9NPI7 259 aaPredicted RBP16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 B3GNT2Q9NY97 397 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 MOKQ9UQ07 419 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 AURKCQ9UQB9 309 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 PLCE1Q9P212 2302 aa16.31■□□□□ 0.2
PRPF40B-206ENST00000547764 ARID1AO14497 2285 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 ATP6V1G2-DDX39BF2Z307 99 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 CELA3BP08861 270 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 CECR9P0C854 216 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 RPL4P36578 427 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 ACVR1BP36896 505 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 MAGEA2P43356 314 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 ERVK-25P63136 954 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 TRAP1Q12931 704 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 BNIP1Q12981 228 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 PGM2L1Q6PCE3 622 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 ZER1Q7Z7L7 766 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 ZNF519Q8TB69 540 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 NMD3Q96D46 503 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 RSRC1Q96IZ7 334 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 LRGUKQ96M69 825 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 KCNK17Q96T54 332 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 GPA33Q99795 319 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 KATNB1Q9BVA0 655 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 MAGIXQ9H6Y5 334 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 SEC61A2Q9H9S3 476 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 TMEM38BQ9NVV0 291 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 ZNF224Q9NZL3 707 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 SIGLEC7Q9Y286 467 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 ATP23Q9Y6H3 246 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 CELSR1Q9NYQ6 3014 aa16.3■□□□□ 0.2
PRPF40B-206ENST00000547764 USF3Q68DE3 2245 aa16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 UNC119BA6NIH7 251 aa16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 CD79AP11912 226 aa16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 ARR3P36575 388 aa16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 IDH3GP51553 393 aaPredicted RBP16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 ZNF133P52736 654 aaPredicted RBP16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 CHRNB3Q05901 458 aa16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 PIGFQ07326 219 aa16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 MYPOPQ86VE0 399 aaPredicted RBP16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 SKA3Q8IX90 412 aa16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 SLC22A24Q8N4F4 322 aa16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 CLDN22Q8N7P3 220 aa16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 HTRA1Q92743 480 aa16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 POP5Q969H6 163 aaKnown RBP16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 DHRS9Q9BPW9 319 aa16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 ALG12Q9BV10 488 aa16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 NOX3Q9HBY0 568 aa16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 TMCC3Q9ULS5 477 aa16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 ADAM18Q9Y3Q7 739 aa16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 MAP1AP78559 2803 aaPredicted RBP16.29■□□□□ 0.2
PRPF40B-206ENST00000547764 ITPR3Q14573 2671 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 IGKV1D-43A0A0B4J1Z2 117 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 OR10H3O60404 316 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 TMCC2O75069 709 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 KRT36O76013 467 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 NDUFB2O95178 105 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 SLC2A10O95528 541 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 STAMBPO95630 424 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 CRYAAP02489 173 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 CD14P08571 375 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 OR8G3PP0DMU2 310 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 ZNF84P51523 738 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 HMGA2P52926 109 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 FXYD6P3P58550 94 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 NKX6-1P78426 367 aaPredicted RBP16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 NAAAQ02083 359 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 FMODQ06828 376 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 CD47Q08722 323 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 NPRL3Q12980 569 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 GSG1Q2KHT4 349 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 FAM98BQ52LJ0 330 aaKnown RBP16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 C10orf128Q5T292 105 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 FAM205BPQ63HN1 556 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 LRRC75A-AS1Q8N1F1 130 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 ARIH2OSQ8N7S6 290 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 NANOS1Q8WY41 292 aaKnown RBP16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 PERPQ96FX8 193 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 KCNS3Q9BQ31 491 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 NDEL1Q9GZM8 345 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 CXorf56Q9H5V9 222 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 FAIMQ9NVQ4 179 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 GRHPRQ9UBQ7 328 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 IL20RAQ9UHF4 553 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 LYVE1Q9Y5Y7 322 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 F8P00451 2351 aa16.28■□□□□ 0.2
PRPF40B-206ENST00000547764 A6NIZ1 184 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 TNFRSF11BO00300 401 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 DNAJC8O75937 253 aaPredicted RBP16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 CD8AP01732 235 aa16.27■□□□□ 0.2
PRPF40B-206ENST00000547764 PATE4P0C8F1 98 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms