RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 TBC1D25Q3MII6 688 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 DMKNQ6E0U4 476 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-215ENST00000547672 MZT2AQ6P582 158 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 DEGS2Q6QHC5 323 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 TRILQ7L0X0 811 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 GLB1L2Q8IW92 636 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 GHDCQ8N2G8 530 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 TMEM178AQ8NBL3 297 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 OR10H5Q8NGA6 315 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 OR6N2Q8NGY6 317 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 OTOSQ8NHW6 89 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 TMEM203Q969S6 136 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 TMED9Q9BVK6 235 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 CDADC1Q9BWV3 514 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 ANKRD10Q9NXR5 420 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 CDV3Q9UKY7 258 aaKnown RBP12.04□□□□□ -0.48
PTCH1-215ENST00000547672 IGLV1-36A0A0B4J1U3 117 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 A0A1W2PNR3 127 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 SHISA8B8ZZ34 492 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 NPIPA2E9PIF3 369 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 NPIPA3F8WFD2 350 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 CASKO14936 926 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 NEURL1O76050 574 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 CDRT1O95170 752 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 WDPCPO95876 746 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 TFP02787 698 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 HPNP05981 417 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 ALOX5APP20292 161 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 IL11P20809 199 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 ENPP1P22413 925 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 EDNRAP25101 427 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 MAPK3P27361 379 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-215ENST00000547672 MTNR1BP49286 362 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 BMXP51813 675 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 FABP5Q01469 135 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 RASGEF1BQ0VAM2 473 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 BCL2A1Q16548 175 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 HYAL4Q2M3T9 481 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 C22orf42Q6IC83 251 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 SPINK14Q6IE38 97 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 ARL9Q6T311 187 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 GPAT4Q86UL3 456 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 SLC22A16Q86VW1 577 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 MARCH9Q86YJ5 346 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 YIPF7Q8N8F6 280 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 FAM83FQ8NEG4 500 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-215ENST00000547672 OR5M1Q8NGP8 315 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 ABHD4Q8TB40 342 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 THEM6Q8WUY1 208 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 ACOT12Q8WYK0 555 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 SLC25A46Q96AG3 418 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 SMIM19Q96E16 107 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 CEP19Q96LK0 163 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 TSSK2Q96PF2 358 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 TIMP4Q99727 224 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 NPAS1Q99742 590 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 MRPL13Q9BYD1 178 aaKnown RBP12.03□□□□□ -0.48
PTCH1-215ENST00000547672 MROQ9BYG7 248 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 TMEM185BQ9H7F4 350 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 B3GNT3Q9Y2A9 372 aa12.03□□□□□ -0.48
PTCH1-215ENST00000547672 ARGFXA6NJG6 315 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 FAM171A2A8MVW0 826 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 ZNF879B4DU55 563 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 G3V3Y1 287 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 ACOT7O00154 380 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 GABRPO00591 440 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 WISP1O95388 367 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 POU3F2P20265 443 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-215ENST00000547672 CD40LGP29965 261 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 RPS19P39019 145 aaKnown RBP12.02□□□□□ -0.49
PTCH1-215ENST00000547672 ADAM8P78325 824 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 PLGLB1Q02325 96 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 ROM1Q03395 351 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 SLC3A1Q07837 685 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 CDK5R1Q15078 307 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 INAQ16352 499 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 TP53I3Q53FA7 332 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 YIF1BQ5BJH7 314 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 SPANXN2Q5MJ10 180 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 HBMQ6B0K9 141 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 VASNQ6EMK4 673 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 C16orf87Q6PH81 154 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 LINC00696Q6ZRV3 163 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 RHOUQ7L0Q8 258 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 ZNF227Q86WZ6 799 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 ZNF679Q8IYX0 411 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 NEIL3Q8TAT5 605 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 ZPLD1Q8TCW7 415 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 GHSRQ92847 366 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 CPNE4Q96A23 557 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-215ENST00000547672 DNAJA3Q96EY1 480 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 PELI1Q96FA3 418 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 TM9SF2Q99805 663 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 HDHD5Q9BXW7 423 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 C6orf62Q9GZU0 229 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-215ENST00000547672 COMMD4Q9H0A8 199 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.02□□□□□ -0.49
PTCH1-215ENST00000547672 SNTG1Q9NSN8 517 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 KLHL13Q9P2N7 655 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 ADAM30Q9UKF2 790 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms