RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 IGHV2-5P01817 119 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 C2P06681 752 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 CAPN1P07384 714 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 DESP17661 470 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 VHLP40337 213 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 CCT3P49368 545 aaKnown RBP1.79□□□□□ -2.12
CCDC38-204ENST00000546816 RPS21P63220 83 aaKnown RBP1.79□□□□□ -2.12
CCDC38-204ENST00000546816 ARG2P78540 354 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 KLHL30Q0D2K2 578 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 PLD1Q13393 1074 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 DNLZQ5SXM8 178 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 SLC25A24Q6NUK1 477 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 CALHM3Q86XJ0 350 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 ZNF679Q8IYX0 411 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 ZNF557Q8N988 423 aaPredicted RBP1.79□□□□□ -2.12
CCDC38-204ENST00000546816 GATSQ8NAP1 163 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 NOXO1Q8NFA2 376 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 ZNF461Q8TAF7 563 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 PDXPQ96GD0 296 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 ZNF607Q96SK3 696 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 SORT1Q99523 831 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 SH3GL1Q99961 368 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 GABARAPL3Q9BY60 117 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 MRPL37Q9BZE1 423 aaKnown RBP1.79□□□□□ -2.12
CCDC38-204ENST00000546816 ADAP2Q9NPF8 381 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 ZNF222Q9UK12 451 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 CEMIPQ8WUJ3 1361 aa1.79□□□□□ -2.12
CCDC38-204ENST00000546816 CDHR2Q9BYE9 1310 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 IGLV3-12A0A075B6K2 115 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 TRAV26-1A0A087WT03 109 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 CLRN2A0PK11 232 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 PCP4L1A6NKN8 68 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 FCMRO60667 390 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 TOM1O60784 492 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 SRP72O76094 671 aaKnown RBP1.78□□□□□ -2.12
CCDC38-204ENST00000546816 FOLR1P15328 257 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 PSMA5P28066 241 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 CD1CP29017 333 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 RORAP35398 523 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 RAP1AP62834 184 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 CDK16Q00536 496 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 PDK3Q15120 406 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 KRTAP6-3Q3LI67 103 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 HES5Q5TA89 166 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 TRIM40Q6P9F5 258 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 CNIH2Q6PI25 160 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 DUX4L9Q6RFH8 374 aaPredicted RBP1.78□□□□□ -2.12
CCDC38-204ENST00000546816 TRIM69Q86WT6 500 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 ECHDC2Q86YB7 292 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 VSTM4Q8IW00 320 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 STPG2Q8N412 459 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 CEP112Q8N8E3 955 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 LINC00304Q8N9R0 145 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 OR4S2Q8NH73 311 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 SYNPRQ8TBG9 265 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 SDR42E1Q8WUS8 393 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 ESR2Q92731 530 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 SGK3Q96BR1 496 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 RPRD1AQ96P16 312 aaPredicted RBP1.78□□□□□ -2.12
CCDC38-204ENST00000546816 SLC38A2Q96QD8 506 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 UGT1A7Q9HAW7 530 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 UGT1A10Q9HAW8 530 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 UGT1A8Q9HAW9 530 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 RAB18Q9NP72 206 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 PALMDQ9NP74 551 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 SH3BGRL2Q9UJC5 107 aa1.78□□□□□ -2.12
CCDC38-204ENST00000546816 MSH6P52701 1360 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 TMEM223A0PJW6 202 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 NDC80O14777 642 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 RBFOX2O43251 390 aaKnown RBP eCLIP1.77□□□□□ -2.13
CCDC38-204ENST00000546816 MPZL1O95297 269 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 PTMAP06454 111 aaKnown RBP1.77□□□□□ -2.13
CCDC38-204ENST00000546816 OGDHQ02218 1023 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 TCP10Q12799 353 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 GINS1Q14691 196 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 ZNF493Q6ZR52 646 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 WDR86Q86TI4 376 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 GMCL1P1Q8NEA9 526 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 OR5D13Q8NGL4 314 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 OR2T3Q8NH03 318 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 STMN2Q93045 179 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 MTMR9Q96QG7 549 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 OR8B4Q96RC9 309 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 SECISBP2Q96T21 854 aaKnown RBP1.77□□□□□ -2.13
CCDC38-204ENST00000546816 COPS8Q99627 209 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 SLC39A3Q9BRY0 314 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 CGNQ9P2M7 1197 aaKnown RBP1.77□□□□□ -2.13
CCDC38-204ENST00000546816 ZNF229Q9UJW7 825 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 BLOC1S6Q9UL45 172 aa1.77□□□□□ -2.13
CCDC38-204ENST00000546816 IGLV3-22A0A075B6J6 115 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 IGKV1D-13A0A0B4J2D9 117 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 OR7A10O76100 309 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 RAB3DO95716 219 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 LINC00869P0C866 280 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 IGKV1-13P0DP09 117 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 TCN2P20062 427 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 SLC2A5P22732 501 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 AK4P27144 223 aaPredicted RBP1.76□□□□□ -2.13
CCDC38-204ENST00000546816 CD34P28906 385 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 NCBP2P52298 156 aaKnown RBP eCLIP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms