RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 BPHLQ86WA6 291 aaPredicted RBP13.83□□□□□ -0.2
CNN3-207ENST00000545882 ADGRG3Q86Y34 549 aa13.83□□□□□ -0.2
CNN3-207ENST00000545882 OR51D1Q8NGF3 324 aa13.83□□□□□ -0.2
CNN3-207ENST00000545882 ZNF417Q8TAU3 575 aa13.83□□□□□ -0.2
CNN3-207ENST00000545882 ATOH1Q92858 354 aaPredicted RBP13.83□□□□□ -0.2
CNN3-207ENST00000545882 MMABQ96EY8 250 aaPredicted RBP13.83□□□□□ -0.2
CNN3-207ENST00000545882 MSANTD3Q96H12 275 aa13.83□□□□□ -0.2
CNN3-207ENST00000545882 KLHL15Q96M94 604 aa13.83□□□□□ -0.2
CNN3-207ENST00000545882 ZNF285Q96NJ3 590 aa13.83□□□□□ -0.2
CNN3-207ENST00000545882 NXF5Q9H1B4 397 aaKnown RBP13.83□□□□□ -0.2
CNN3-207ENST00000545882 SYT4Q9H2B2 425 aa13.83□□□□□ -0.2
CNN3-207ENST00000545882 KCNK15Q9H427 330 aa13.83□□□□□ -0.2
CNN3-207ENST00000545882 GPR27Q9NS67 375 aa13.83□□□□□ -0.2
CNN3-207ENST00000545882 SPEF1Q9Y4P9 236 aa13.83□□□□□ -0.2
CNN3-207ENST00000545882 COL5A1P20908 1838 aaPredicted RBP13.83□□□□□ -0.2
CNN3-207ENST00000545882 TUBAL3A6NHL2 446 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 C17orf51A8MQB3 221 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 C17orf105B2RV13 164 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 B4DGG1 531 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 L7N2F9 121 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 SUSD5O60279 629 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 CTAG2O75638 210 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 RBBP9O75884 186 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 ZNF432O94892 652 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 WISP1O95388 367 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 NFYAP23511 347 aaPredicted RBP13.82□□□□□ -0.2
CNN3-207ENST00000545882 MAZP56270 477 aaKnown RBP13.82□□□□□ -0.2
CNN3-207ENST00000545882 SCAND1P57086 179 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 RAB14P61106 215 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 PCGF3Q3KNV8 242 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 WDR38Q5JTN6 314 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 SFRP5Q5T4F7 317 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 COL13A1Q5TAT6 717 aaPredicted RBP13.82□□□□□ -0.2
CNN3-207ENST00000545882 NKAIN2Q5VXU1 208 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 ASPHD2Q6ICH7 369 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 ANKRD16Q6P6B7 361 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 C3P1Q6ZMU1 363 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 GPAT4Q86UL3 456 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 ZNF227Q86WZ6 799 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 PM20D2Q8IYS1 436 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 ZNF676Q8N7Q3 588 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 PTPMT1Q8WUK0 201 aaPredicted RBP13.82□□□□□ -0.2
CNN3-207ENST00000545882 RBPMSQ93062 196 aaKnown RBP13.82□□□□□ -0.2
CNN3-207ENST00000545882 C4orf45Q96LM5 186 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 ADAM19Q9H013 955 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 PRODH2Q9UF12 536 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 KIF25Q9UIL4 384 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 KCNG2Q9UJ96 466 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 GGT3PA6NGU5 568 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 SHISA7A6NL88 538 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 TMEM212A6NML5 194 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 SIX6O95475 246 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 BGLAPP02818 100 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 HIST1H2ABP04908 130 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 ATXN8OSP0DMR3 200 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 CTSEP14091 401 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 CFPP27918 469 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 GALNSP34059 522 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 H2BFSP57053 126 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 SLC37A1P57057 533 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 YOD1Q5VVQ6 348 aaPredicted RBP13.82□□□□□ -0.2
CNN3-207ENST00000545882 C1QL3Q5VWW1 255 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 HIST3H2AQ7L7L0 130 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 SDR16C5Q8N3Y7 309 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 OR5M1Q8NGP8 315 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 GPR148Q8TDV2 347 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 ADAMTS18Q8TE60 1221 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 HIST1H2ACQ93077 130 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 PNPLA2Q96AD5 504 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 OMA1Q96E52 524 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 DNAJA3Q96EY1 480 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 DCBLD2Q96PD2 775 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 INTS14Q96SY0 518 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 MNTQ99583 582 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 COMMD4Q9H0A8 199 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 C8orf33Q9H7E9 229 aaPredicted RBP13.82□□□□□ -0.2
CNN3-207ENST00000545882 ZNF224Q9NZL3 707 aa13.82□□□□□ -0.2
CNN3-207ENST00000545882 A0A0C4DFX4 3053 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 CHURC1-FNTBB4DL54 471 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 SCDO00767 359 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 KDM4BO94953 1096 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 RENP00797 406 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 ITGA5P08648 1049 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 THEGLP0DJG4 465 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 CSF2RBP32927 897 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 PPICP45877 212 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 FNTBP49356 437 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 SKP1P63208 163 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 HLXQ14774 488 aaPredicted RBP13.81□□□□□ -0.2
CNN3-207ENST00000545882 RBMS2Q15434 407 aaKnown RBP13.81□□□□□ -0.2
CNN3-207ENST00000545882 FAM198BQ6UWH4 519 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 PPP1R14AQ96A00 147 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 CLIP3Q96DZ5 547 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 TCTN2Q96GX1 697 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 GINS4Q9BRT9 223 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 C1QTNF6Q9BXI9 259 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 MMP17Q9ULZ9 603 aa13.81□□□□□ -0.2
CNN3-207ENST00000545882 ACSM4P0C7M7 580 aa13.8□□□□□ -0.2
CNN3-207ENST00000545882 HPGDP15428 266 aa13.8□□□□□ -0.2
CNN3-207ENST00000545882 UBE2MP61081 183 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms