RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 KRCC1Q9NPI7 259 aaPredicted RBP13.68□□□□□ -0.22
CCDC78-216ENST00000544996 TMEM38BQ9NVV0 291 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 B3GNT2Q9NY97 397 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 ROS1P08922 2347 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 HIVEP1P15822 2718 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 DSCAMO60469 2012 aa13.68□□□□□ -0.22
CCDC78-216ENST00000544996 TRAV27A0A087WT01 109 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 VSTM5A8MXK1 200 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 TRMUO75648 421 aaKnown RBP13.67□□□□□ -0.22
CCDC78-216ENST00000544996 UBL3O95164 117 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 RAB36O95755 333 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 GPR4P46093 362 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 CTXN1P60606 82 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 RPL27P61353 136 aaKnown RBP13.67□□□□□ -0.22
CCDC78-216ENST00000544996 VLDLRP98155 873 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 RUNX1T1Q06455 604 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 TOP3AQ13472 1001 aaPredicted RBP13.67□□□□□ -0.22
CCDC78-216ENST00000544996 HIST3H3Q16695 136 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 ARMC4Q5T2S8 1044 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 FAM205BPQ63HN1 556 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 PODNL1Q6PEZ8 512 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 DPPA2Q7Z7J5 298 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 SLC22A24Q8N4F4 322 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 OR13C2Q8NGS9 318 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 C18orf12Q96KH6 178 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 TNFRSF13CQ96RJ3 184 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 ZNF347Q96SE7 839 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 SEPHS2Q99611 448 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 BARX1Q9HBU1 254 aaPredicted RBP13.67□□□□□ -0.22
CCDC78-216ENST00000544996 FBXL3Q9UKT7 428 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 ITPR3Q14573 2671 aa13.67□□□□□ -0.22
CCDC78-216ENST00000544996 ZNF503-AS2A6NEH8 195 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 A6NIZ1 184 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 MGRN1O60291 552 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 DIRAS1O95057 198 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 IGHMP01871 453 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 FABP3P05413 133 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 CELA3BP08861 270 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 RPL4P36578 427 aaKnown RBP13.66□□□□□ -0.22
CCDC78-216ENST00000544996 GIPRP48546 466 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 PTDSS1P48651 473 aaKnown RBP13.66□□□□□ -0.22
CCDC78-216ENST00000544996 RAP1BP61224 184 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 RAB1AP62820 205 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 RAP1AP62834 184 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 MYBPC1Q00872 1141 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 CD47Q08722 323 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 NRN1LQ496H8 165 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 ZBED5Q49AG3 693 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 SKA3Q8IX90 412 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 OR52J3Q8NH60 311 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 FNDC8Q8TC99 324 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 BCAS4Q8TDM0 211 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 FAM46AQ96IP4 442 aaKnown RBP13.66□□□□□ -0.22
CCDC78-216ENST00000544996 RBP7Q96R05 134 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 CACNG6Q9BXT2 260 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 MUC13Q9H3R2 512 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 SMURF2Q9HAU4 748 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 DLL4Q9NR61 685 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 CA10Q9NS85 328 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 ACTR3BQ9P1U1 418 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 PMF1-BGLAPU3KQ54 211 aa13.66□□□□□ -0.22
CCDC78-216ENST00000544996 GADD45GO95257 159 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 SEMG1P04279 462 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 CALCRP30988 508 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 ACVR1BP36896 505 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 SERPINF1P36955 418 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 SPIBQ01892 262 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 SLC36A2Q495M3 483 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 MTX3Q5HYI7 312 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 THEM4Q5T1C6 240 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 C11orf71Q6IPW1 123 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 VHLLQ6RSH7 139 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 RINLQ6ZS11 566 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 IGFN1Q86VF2 1251 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 LRRC75AQ8NAA5 344 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 NUP37Q8NFH4 326 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 OR4K5Q8NGD3 323 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 HDAC2Q92769 488 aaKnown RBP13.65□□□□□ -0.22
CCDC78-216ENST00000544996 FBXO17Q96EF6 278 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 DHRS1Q96LJ7 313 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 ALG12Q9BV10 488 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 KCNN2Q9H2S1 579 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 SEC61A2Q9H9S3 476 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 IL1RAPQ9NPH3 570 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 GRHPRQ9UBQ7 328 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 ZNF346Q9UL40 294 aaKnown RBP13.65□□□□□ -0.22
CCDC78-216ENST00000544996 AURKCQ9UQB9 309 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 SPEF1Q9Y4P9 236 aa13.65□□□□□ -0.22
CCDC78-216ENST00000544996 IGHV2OR16-5A0A0B4J2B6 119 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 TRBV4-1A0A0J9YWV2 114 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 CDC42EP2O14613 210 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 CD14P08571 375 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 INHBBP09529 407 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 OR4A8P0C604 315 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 T-ENOLP0DO92 83 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 GUCA1AP43080 201 aaPredicted RBP13.64□□□□□ -0.23
CCDC78-216ENST00000544996 ZNF133P52736 654 aaPredicted RBP13.64□□□□□ -0.23
CCDC78-216ENST00000544996 SNRPD2P62316 118 aaKnown RBP13.64□□□□□ -0.23
CCDC78-216ENST00000544996 RAB35Q15286 201 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 CLEC12BQ2HXU8 276 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms