RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SELENOFO60613 162 aa27.1■■□□□ 1.93
CCM2-219ENST00000544363 TFP02787 698 aa27.1■■□□□ 1.93
CCM2-219ENST00000544363 PGA4P0DJD7 388 aa27.1■■□□□ 1.93
CCM2-219ENST00000544363 PGA3P0DJD8 388 aa27.1■■□□□ 1.93
CCM2-219ENST00000544363 NAA10P41227 235 aaPredicted RBP27.1■■□□□ 1.93
CCM2-219ENST00000544363 CENPAP49450 140 aa27.1■■□□□ 1.93
CCM2-219ENST00000544363 WNT4P56705 351 aa27.1■■□□□ 1.93
CCM2-219ENST00000544363 CAMK2DQ13557 499 aa27.1■■□□□ 1.93
CCM2-219ENST00000544363 GPR107Q5VW38 600 aa27.1■■□□□ 1.93
CCM2-219ENST00000544363 ABHD17AQ96GS6 310 aa27.1■■□□□ 1.93
CCM2-219ENST00000544363 MGLLQ99685 303 aa27.1■■□□□ 1.93
CCM2-219ENST00000544363 TIMP4Q99727 224 aa27.1■■□□□ 1.93
CCM2-219ENST00000544363 ZNF407Q9C0G0 2248 aa27.1■■□□□ 1.93
CCM2-219ENST00000544363 OR2T7P0C7T2 308 aa27.09■■□□□ 1.93
CCM2-219ENST00000544363 BLVRAP53004 296 aa27.09■■□□□ 1.93
CCM2-219ENST00000544363 DOC2BQ14184 412 aa27.09■■□□□ 1.93
CCM2-219ENST00000544363 OR2G6Q5TZ20 316 aa27.09■■□□□ 1.93
CCM2-219ENST00000544363 DNM1P34Q6PK57 102 aa27.09■■□□□ 1.93
CCM2-219ENST00000544363 FCRLAQ7L513 359 aa27.09■■□□□ 1.93
CCM2-219ENST00000544363 SLC35F2Q8IXU6 374 aa27.09■■□□□ 1.93
CCM2-219ENST00000544363 KLHL36Q8N4N3 616 aa27.09■■□□□ 1.93
CCM2-219ENST00000544363 NOXO1Q8NFA2 376 aa27.09■■□□□ 1.93
CCM2-219ENST00000544363 OR2T27Q8NH04 317 aa27.09■■□□□ 1.93
CCM2-219ENST00000544363 SMAP2Q8WU79 429 aaPredicted RBP27.09■■□□□ 1.93
CCM2-219ENST00000544363 EXTL1Q92935 676 aa27.09■■□□□ 1.93
CCM2-219ENST00000544363 RBP7Q96R05 134 aa27.09■■□□□ 1.93
CCM2-219ENST00000544363 CYTIPO60759 359 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 HSMCR30P0CW71 290 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 CLRN1P58418 232 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 GALEQ14376 348 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 ARMCX4Q5H9R4 360 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 TIGD4Q8IY51 512 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 OR52N1Q8NH53 320 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 ZNF385AQ96PM9 386 aaKnown RBP27.08■■□□□ 1.93
CCM2-219ENST00000544363 CAB39Q9Y376 341 aaPredicted RBP27.08■■□□□ 1.93
CCM2-219ENST00000544363 ZNF716A6NP11 495 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 CPN1P15169 458 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 FMODQ06828 376 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 ETFDHQ16134 617 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 THEM4Q5T1C6 240 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 SLC16A9Q7RTY1 509 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 ZIC4Q8N9L1 334 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 SNRNP27Q8WVK2 155 aaKnown RBP27.08■■□□□ 1.93
CCM2-219ENST00000544363 YIPF6Q96EC8 236 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 WDYHV1Q96HA8 205 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 TAAR6Q96RI8 345 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 ALG8Q9BVK2 526 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 MARCH7Q9H992 704 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 B3GNT3Q9Y2A9 372 aa27.08■■□□□ 1.93
CCM2-219ENST00000544363 DNAJC13O75165 2243 aa27.07■■□□□ 1.92
CCM2-219ENST00000544363 A0A1W2PQL4 384 aaPredicted RBP27.07■■□□□ 1.92
CCM2-219ENST00000544363 TVP23AA6NH52 213 aa27.07■■□□□ 1.92
CCM2-219ENST00000544363 CENPBD1B2RD01 187 aa27.07■■□□□ 1.92
CCM2-219ENST00000544363 LIPAP38571 399 aa27.07■■□□□ 1.92
CCM2-219ENST00000544363 CD79BP40259 229 aa27.07■■□□□ 1.92
CCM2-219ENST00000544363 ZNF85Q03923 595 aa27.07■■□□□ 1.92
CCM2-219ENST00000544363 ERI1Q8IV48 349 aaKnown RBP27.07■■□□□ 1.92
CCM2-219ENST00000544363 ZNF485Q8NCK3 441 aa27.07■■□□□ 1.92
CCM2-219ENST00000544363 NMD3Q96D46 503 aaKnown RBP27.07■■□□□ 1.92
CCM2-219ENST00000544363 FUNDC2Q9BWH2 189 aa27.07■■□□□ 1.92
CCM2-219ENST00000544363 RSL24D1Q9UHA3 163 aaKnown RBP27.07■■□□□ 1.92
CCM2-219ENST00000544363 DMXL2Q8TDJ6 3036 aa27.07■■□□□ 1.92
CCM2-219ENST00000544363 KHDRBS3O75525 346 aaKnown RBP27.06■■□□□ 1.92
CCM2-219ENST00000544363 SYNGR4O95473 234 aa27.06■■□□□ 1.92
CCM2-219ENST00000544363 HCCSP53701 268 aa27.06■■□□□ 1.92
CCM2-219ENST00000544363 CARD17Q5XLA6 110 aa27.06■■□□□ 1.92
CCM2-219ENST00000544363 RPUSD3Q6P087 351 aaKnown RBP27.06■■□□□ 1.92
CCM2-219ENST00000544363 TMPRSS11AQ6ZMR5 421 aa27.06■■□□□ 1.92
CCM2-219ENST00000544363 ZNF420Q8TAQ5 688 aaPredicted RBP27.06■■□□□ 1.92
CCM2-219ENST00000544363 FNDC8Q8TC99 324 aa27.06■■□□□ 1.92
CCM2-219ENST00000544363 GATAD2BQ8WXI9 593 aa27.06■■□□□ 1.92
CCM2-219ENST00000544363 COA3Q9Y2R0 106 aaPredicted RBP27.06■■□□□ 1.92
CCM2-219ENST00000544363 FLVCR1Q9Y5Y0 555 aa27.06■■□□□ 1.92
CCM2-219ENST00000544363 A0A087WV48 116 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 IGKV1D-43A0A0B4J1Z2 117 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 A0A1B0GVC2 190 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 C1QTNF9BB2RNN3 333 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 GPANK1O95872 356 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 C1QTNF9P0C862 333 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 GLO1Q04760 184 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 RASGEF1BQ0VAM2 473 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 HIST3H3Q16695 136 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 ZNF322Q6U7Q0 402 aaPredicted RBP27.05■■□□□ 1.92
CCM2-219ENST00000544363 SIAH3Q8IW03 269 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 OPALINQ96PE5 141 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 OR2M2Q96R28 347 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 INTS14Q96SY0 518 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 NAA50Q9GZZ1 169 aaKnown RBP27.05■■□□□ 1.92
CCM2-219ENST00000544363 MCTS1Q9ULC4 181 aaKnown RBP27.05■■□□□ 1.92
CCM2-219ENST00000544363 TP53TG5Q9Y2B4 290 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 LAMA5O15230 3695 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 AKAP8O43823 692 aaKnown RBP27.05■■□□□ 1.92
CCM2-219ENST00000544363 HLA-DQA2P01906 255 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 SCG5P05408 212 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 PTGS2P35354 604 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 TGFBR2P37173 567 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 CXADRP78310 365 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 MLLT11Q13015 90 aaPredicted RBP27.05■■□□□ 1.92
CCM2-219ENST00000544363 C3AR1Q16581 482 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 ISOC1Q96CN7 298 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms