RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 SP5Q6BEB4 398 aaPredicted RBP11.98□□□□□ -0.49
SP140-213ENST00000543928 LRFN4Q6PJG9 635 aa11.98□□□□□ -0.49
SP140-213ENST00000543928 MEX3BQ6ZN04 569 aaKnown RBP11.98□□□□□ -0.49
SP140-213ENST00000543928 DMRTC2Q8IXT2 367 aaPredicted RBP11.98□□□□□ -0.49
SP140-213ENST00000543928 ACBD4Q8NC06 268 aa11.98□□□□□ -0.49
SP140-213ENST00000543928 STEAP2Q8NFT2 490 aa11.98□□□□□ -0.49
SP140-213ENST00000543928 OR4Q3Q8NH05 313 aa11.98□□□□□ -0.49
SP140-213ENST00000543928 LINC01560Q8TB33 94 aa11.98□□□□□ -0.49
SP140-213ENST00000543928 MCHR2Q969V1 340 aa11.98□□□□□ -0.49
SP140-213ENST00000543928 S100PBPQ96BU1 408 aa11.98□□□□□ -0.49
SP140-213ENST00000543928 ZNF837Q96EG3 531 aaPredicted RBP11.98□□□□□ -0.49
SP140-213ENST00000543928 CIB1Q99828 191 aa11.98□□□□□ -0.49
SP140-213ENST00000543928 ACTR6Q9GZN1 396 aa11.98□□□□□ -0.49
SP140-213ENST00000543928 KRT84Q9NSB2 600 aa11.98□□□□□ -0.49
SP140-213ENST00000543928 PRSS37A4D1T9 235 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 TUBAL3A6NHL2 446 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 H0YHG0 523 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 RRP9O43818 475 aaKnown RBP11.97□□□□□ -0.49
SP140-213ENST00000543928 IDH3BO43837 385 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 MITFO75030 526 aaPredicted RBP11.97□□□□□ -0.49
SP140-213ENST00000543928 NR2C1P13056 603 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 ANPEPP15144 967 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 SH3BGRP55822 239 aaPredicted RBP11.97□□□□□ -0.49
SP140-213ENST00000543928 ARF1P84077 181 aaKnown RBP11.97□□□□□ -0.49
SP140-213ENST00000543928 PPP2R2BQ00005 443 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 FMODQ06828 376 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 GABRA6Q16445 453 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 SLC35F1Q5T1Q4 408 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 LCE2DQ5TA82 110 aaPredicted RBP11.97□□□□□ -0.49
SP140-213ENST00000543928 OR7E24Q6IFN5 339 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 PTCHD4Q6ZW05 846 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 ADCK1Q86TW2 530 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 PARP8Q8N3A8 854 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 IQCF1Q8N6M8 205 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 C1orf162Q8NEQ5 155 aaPredicted RBP11.97□□□□□ -0.49
SP140-213ENST00000543928 OR2T33Q8NG76 320 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 OR1K1Q8NGR3 316 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 OR4K13Q8NH42 304 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 NMD3Q96D46 503 aaKnown RBP11.97□□□□□ -0.49
SP140-213ENST00000543928 MUS81Q96NY9 551 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 WFIKKN1Q96NZ8 548 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 RBP7Q96R05 134 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 RBM4BQ9BQ04 359 aaKnown RBP11.97□□□□□ -0.49
SP140-213ENST00000543928 C9orf16Q9BUW7 83 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 RBM4Q9BWF3 364 aaKnown RBP11.97□□□□□ -0.49
SP140-213ENST00000543928 OSBPL10Q9BXB5 764 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 OR10A4Q9H209 315 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 BAIAP2Q9UQB8 552 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 BAHCC1Q9P281 2608 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 PKDREJQ9NTG1 2253 aa11.97□□□□□ -0.49
SP140-213ENST00000543928 IGKV1D-43A0A0B4J1Z2 117 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 SLC22A23A1A5C7 686 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 ZNF99A8MXY4 864 aaPredicted RBP11.96□□□□□ -0.49
SP140-213ENST00000543928 EI24O14681 340 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 DHHO43323 396 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 AHCYL1O43865 530 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 SEC14L2O76054 403 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 SLC2A10O95528 541 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 PPP3CBP16298 524 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 HIST1H1CP16403 213 aaKnown RBP11.96□□□□□ -0.49
SP140-213ENST00000543928 IGFBP5P24593 272 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 CDKN2AP42771 156 aaKnown RBP11.96□□□□□ -0.49
SP140-213ENST00000543928 KIR2DL3P43628 341 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 ZNF133P52736 654 aaPredicted RBP11.96□□□□□ -0.49
SP140-213ENST00000543928 CRISP1P54107 249 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 DAG1Q14118 895 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 GINS1Q14691 196 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 STK11Q15831 433 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 THEM4Q5T1C6 240 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 LEG1Q6P5S2 330 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 C22orf34Q6ZV56 151 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 JAZF1Q86VZ6 243 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 LNX2Q8N448 690 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 CBR4Q8N4T8 237 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 FNDC8Q8TC99 324 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 NSMAFQ92636 917 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 EME1Q96AY2 570 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 ZC3HAV1LQ96H79 300 aaKnown RBP11.96□□□□□ -0.49
SP140-213ENST00000543928 NMNAT3Q96T66 252 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 SPOCK3Q9BQ16 436 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 MED18Q9BUE0 208 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 SYT4Q9H2B2 425 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 VSX1Q9NZR4 365 aaPredicted RBP11.96□□□□□ -0.49
SP140-213ENST00000543928 CRIM1Q9NZV1 1036 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 NDRG3Q9UGV2 375 aa11.96□□□□□ -0.49
SP140-213ENST00000543928 TMEFF2Q9UIK5 374 aaPredicted RBP11.96□□□□□ -0.49
SP140-213ENST00000543928 PRR14LQ5THK1 2151 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 A0A096LPE4 126 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 A0A1W2PPZ6 126 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 SH3D21A4FU49 640 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 ALPLP05186 524 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 COX6B1P14854 86 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 B4GALT1P15291 398 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 GIPRP48546 466 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 ZNF84P51523 738 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 ALDH3A2P51648 485 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 ESRRGP62508 458 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.95□□□□□ -0.5
SP140-213ENST00000543928 PGGHGQ32M88 737 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 TBRG1Q3YBR2 411 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms