RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 ZNF583Q96ND8 569 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 YAE1D1Q9NRH1 226 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 CLEC1BQ9P126 229 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 ALG5Q9Y673 324 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 BORCS7-ASMTA0A0B4J1R7 106 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 TGFAP01135 160 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 CRYAAP02489 173 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 PDGFAP04085 211 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 OR8G3PP0DMU2 310 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 SERPINA2P20848 420 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 SUMO3P55854 103 aaPredicted RBP6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 MTCP1P56278 107 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 SPOCK1Q08629 439 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 CT83Q5H943 113 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 STEAP3Q658P3 488 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 NAXDQ8IW45 347 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 BCORP1Q8N888 145 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 BOD1Q96IK1 185 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 NMNAT3Q96T66 252 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 SDF2Q99470 211 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 MED17Q9NVC6 651 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 P4HTMQ9NXG6 502 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 ASIC5Q9NY37 505 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF224Q9NZL3 707 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 NDRG4Q9ULP0 352 aaKnown RBP6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 HSF4Q9ULV5 492 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 FAM186AA6NE01 2351 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 M0R036 132 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 DVL2O14641 736 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 CYB5BO43169 146 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 DENRO43583 198 aaKnown RBP6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 DPM1O60762 260 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 AKR1C4P17516 323 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 GPX2P18283 190 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 MC5RP33032 325 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 RFC3P40938 356 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 TCTN3Q6NUS6 607 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 CD300LGQ6UXG3 332 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 DPY19L2P2Q6ZN68 376 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF836Q6ZNA1 936 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 GDPGP1Q6ZNW5 385 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 SULF2Q8IWU5 870 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 FAM217AQ8IXS0 508 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 GJC3Q8NFK1 279 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 STEAP2Q8NFT2 490 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 OR11G2Q8NGC1 345 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 OR6Q1Q8NGQ2 317 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 CHPT1Q8WUD6 406 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 RSPRY1Q96DX4 576 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 SYNPO2LQ9H987 977 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 FKRPQ9H9S5 495 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 GLRX2Q9NS18 164 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 PITPNC1Q9UKF7 332 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 LOXHD1Q8IVV2 1947 aa6.33□□□□□ -1.4
SRGAP1-206ENST00000543397 SORBS2O94875 1100 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 GNG10P50151 68 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 LIMS2Q7Z4I7 341 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 GDF7Q7Z4P5 450 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 TMEM150AQ86TG1 271 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 CPEB3Q8NE35 698 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 ZCCHC14Q8WYQ9 949 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 GPR61Q9BZJ8 451 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 ANKRD19PQ9H560 264 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 APMAPQ9HDC9 416 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 ERVK13-1Q9NX77 482 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 BABAM2Q9NXR7 383 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 TCRBV3S1A0A5B6 114 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 TSPAN11A1L157 253 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 PPM1DO15297 605 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 FZD7O75084 574 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 DRD3P35462 400 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 SERPINF1P36955 418 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 LGALS4P56470 323 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 AIMP2Q13155 320 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 OR8B8Q15620 311 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 KHDC1LQ5JSQ8 128 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 OLIG3Q7RTU3 272 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 LRRC56Q8IYG6 542 aaPredicted RBP6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 OR7G2Q8NG99 324 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 ST6GALNAC5Q9BVH7 336 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 METTL9Q9H1A3 318 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 CNOT2Q9NZN8 540 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 MYOTQ9UBF9 498 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 CTSFQ9UBX1 484 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 TP53TG5Q9Y2B4 290 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 KIAA1551Q9HCM1 1747 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 CACNA1CQ13936 2221 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 ARAP2Q8WZ64 1704 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 M0R082 166 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 TOR1AO14656 332 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 PRAMEF4O60810 478 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 SLC34A2O95436 690 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 KNG1P01042 644 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 ACP2P11117 423 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 BCKDHBP21953 392 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 ABCD3P28288 659 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 PNLIPRP2P54317 469 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 CRMP1Q14194 572 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 UBE2UQ5VVX9 321 aa6.32□□□□□ -1.4
SRGAP1-206ENST00000543397 PGAP1Q75T13 922 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms