RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PRSS23O95084 383 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 BCL10O95999 233 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 F13BP05160 661 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 QDPRP09417 244 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 UMPSP11172 480 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 SLC25A16P16260 332 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 PTDSS1P48651 473 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 GSK3BP49841 420 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 PPOXP50336 477 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 SEC24CP53992 1094 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 DAG1Q14118 895 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 LAPTM4AQ15012 233 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 TMEM249Q2WGJ8 235 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 CBLL1Q75N03 491 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 ARPINQ7Z6K5 226 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 ZCCHC24Q8N2G6 241 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 TPD52L3Q96J77 140 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 PRRC1Q96M27 445 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 ZNF347Q96SE7 839 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 EFCAB1Q9HAE3 211 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 ABCD2Q9UBJ2 740 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 HIF3AQ9Y2N7 669 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 MED31Q9Y3C7 131 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 NPIPB13A6NJU9 1138 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 NPIPB4C9JG80 1138 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 J3KTA2 159 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 hCG_2039718K7EN88 272 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 CXCR6O00574 342 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 TLX2O43763 284 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 TRMUO75648 421 aaKnown RBP11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 UBL3O95164 117 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 IGHG1P01857 330 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 SERPINA5P05154 406 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 CSF3P09919 207 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 OR8G3PP0DMU2 310 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 MAKP20794 623 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 GLRXP35754 106 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 VLDLRP98155 873 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 PPP2R2BQ00005 443 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 ST3GAL3Q11203 375 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 SNTB2Q13425 540 aaKnown RBP11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 RAB39AQ14964 217 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 FXNQ16595 210 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 C10orf128Q5T292 105 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 KRT80Q6KB66 452 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 CDK20Q8IZL9 346 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 OFCC1Q8IZS5 231 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 SVOPLQ8N434 492 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 LRRC75AQ8NAA5 344 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 SYT14Q8NB59 555 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 SH3GL3Q99963 347 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 INIPQ9NRY2 104 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 UGT2A1Q9Y4X1 527 aa11.3□□□□□ -0.6
TNFRSF1A-215ENST00000543359 IGKV1D-43A0A0B4J1Z2 117 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 A0A1W2PRG6 482 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 HTR3EA5X5Y0 456 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 MMP7P09237 267 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 ACADSP16219 412 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 DRD4P21917 467 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 NR4A2P43354 598 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 YAP1P46937 504 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 EVX1P49640 407 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 PRKCDQ05655 676 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 NRN1LQ496H8 165 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 C6orf52Q5T4I8 152 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 SPATA21Q7Z572 469 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 LRP11Q86VZ4 500 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 MEX3DQ86XN8 651 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 PAQR4Q8N4S7 273 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 OR4K5Q8NGD3 323 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 LZICQ8WZA0 190 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 HDAC2Q92769 488 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 MRPL24Q96A35 216 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 BPIFA2Q96DR5 249 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 FOXN4Q96NZ1 517 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 KCNK17Q96T54 332 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 VRK1Q99986 396 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 ELAC2Q9BQ52 826 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 MRPL37Q9BZE1 423 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 TXNIPQ9H3M7 391 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 RHCGQ9UBD6 479 aa11.29□□□□□ -0.6
TNFRSF1A-215ENST00000543359 ANK2Q01484 3957 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 IGHV4-61A0A0C4DH41 118 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 LOC390937A0A1W2PQ73 354 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 NDUFS8O00217 210 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 SNX3O60493 162 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 RAB36O95755 333 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 TP53P04637 393 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 IFNW1P05000 195 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 IGHV4-31P0DP07 118 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 IFI30P13284 250 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 USF1P22415 310 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 PDLIM4P50479 330 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 NUDT2P50583 147 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 DAP3P51398 398 aaKnown RBP11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 CLRN1P58418 232 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 PSME3P61289 254 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 MYBPC1Q00872 1141 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 SLC25A47Q6Q0C1 308 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 TBPL2Q6SJ96 375 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms