RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 CERS1P27544 350 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 APOBEC3AP31941 199 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 TSFMP43897 325 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 ZP1P60852 638 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 RPS15AP62244 130 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 MC2RQ01718 297 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 DUSP2Q05923 314 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 IL24Q13007 206 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 SKP2Q13309 424 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 GK2Q14410 553 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 GSG1Q2KHT4 349 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 CRB2Q5IJ48 1285 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 HACD4Q5VWC8 232 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 SFRP4Q6FHJ7 346 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 ZC3H14Q6PJT7 736 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 C6orf15Q6UXA7 325 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 NDUFAF7Q7L592 441 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 SIAH3Q8IW03 269 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 PDZD9Q8IXQ8 264 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 PIP4P2Q8N4L2 257 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 HORMAD2Q8N7B1 307 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 TSTD1Q8NFU3 115 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 OR5D18Q8NGL1 313 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 SUN3Q8TAQ9 357 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 ZDHHC1Q8WTX9 485 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 CNOT9Q92600 299 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 OR2A5Q96R48 311 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 GGACTQ9BVM4 153 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 TPSD1Q9BZJ3 242 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 NKX6-2Q9C056 277 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 OR10A4Q9H209 315 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 POT1Q9NUX5 634 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 NCDNQ9UBB6 729 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 LHX6Q9UPM6 363 aa7.3□□□□□ -1.24
PDLIM5-221ENST00000542407 SLC19A2O60779 497 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 AHSA1O95433 338 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 AIFM1O95831 613 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 WNT1P04628 370 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 EIF4EP06730 217 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 LIPFP07098 398 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 FGF2P09038 288 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 SMIM10L1P0DMW3 83 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 SOAT1P35610 550 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 PRPS1P60891 318 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 RAB2AP61019 212 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 MELKQ14680 651 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 CEBPEQ15744 281 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 ZNF630Q2M218 657 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 ZNF542PQ5EBM4 170 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 SLC22A25Q6T423 547 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 RELL2Q8NC24 303 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 RNASE8Q8TDE3 154 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 MRPS24Q96EL2 167 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 ABHD17AQ96GS6 310 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 SMIM10Q96HG1 83 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 DMRTA2Q96SC8 542 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 ARL6Q9H0F7 186 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 POLR2J3Q9H1A7 115 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 GLIPR2Q9H4G4 154 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 A4GALTQ9NPC4 353 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 MGAT4CQ9UBM8 478 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 SLC6A5Q9Y345 797 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 A0A1W2PR77 199 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 A0A1W2PS29 197 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 D6RAR5 112 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 NPIPA2E9PIF3 369 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 ITGA10O75578 1167 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 RP2O75695 350 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 OSMP13725 252 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 PVALBP20472 110 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 NFYAP23511 347 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 ID4P47928 161 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 MANFP55145 182 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 CDK6Q00534 326 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 HSPB3Q12988 150 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 BEX5Q5H9J7 111 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 AVPI1Q5T686 147 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 TRIM40Q6P9F5 258 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 HAGHLQ6PII5 290 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 UNQ6494/PRO21346Q6UXR6 183 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 GPR137CQ8N3F9 429 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 EIF4E3Q8N5X7 224 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 UXS1Q8NBZ7 420 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 OR8J1Q8NGP2 316 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 SLC37A2Q8TED4 501 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 APOBEC4Q8WW27 367 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 ABHD1Q96SE0 405 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 LRRC61Q9BV99 259 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 FOXQ1Q9C009 403 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 RNF32Q9H0A6 362 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 PTGFRNQ9P2B2 879 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 MDC1Q14676 2089 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 KIR2DS5A0A0G2JLQ3 304 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 A0A0G2JNG1 304 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 PRAMEF27A3QJZ7 478 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 PGPEP1LA6NFU8 196 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 KIR2DS3K7RE56 304 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 HMGN4O00479 90 aa7.29□□□□□ -1.24
PDLIM5-221ENST00000542407 GABRPO00591 440 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms