RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 ZNF133P52736 654 aaPredicted RBP17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 CTXN1P60606 82 aa17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 RPL27P61353 136 aaKnown RBP17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 NAAAQ02083 359 aa17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 MTX3Q5HYI7 312 aa17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 Q5PR19 223 aa17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 TRPM8Q7Z2W7 1104 aa17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 MDP1Q86V88 176 aa17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 LRRC75AQ8NAA5 344 aa17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 NOXO1Q8NFA2 376 aa17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 OR13C2Q8NGS9 318 aa17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 NANOS1Q8WY41 292 aaKnown RBP17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 MCHR2Q969V1 340 aa17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 ZNF347Q96SE7 839 aa17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 FUZQ9BT04 418 aa17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 MUC13Q9H3R2 512 aa17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 DENND2DQ9H6A0 471 aaPredicted RBP17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 IL1RAPQ9NPH3 570 aa17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 TAS2R1Q9NYW7 299 aa17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 USF3Q68DE3 2245 aa17.47■□□□□ 0.39
CACNA2D4-215ENST00000542340 TRBV4-1A0A0J9YWV2 114 aa17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 CDC42EP2O14613 210 aa17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 FABP3P05413 133 aa17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 OR8G3PP0DMU2 310 aa17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 CD79AP11912 226 aa17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 IDH3GP51553 393 aaPredicted RBP17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 TRIM25Q14258 630 aaKnown RBP17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 GSG1Q2KHT4 349 aa17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 NRN1LQ496H8 165 aa17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 ZBED5Q49AG3 693 aa17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 FAM205BPQ63HN1 556 aa17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 FBXL14Q8N1E6 418 aa17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 SLC22A24Q8N4F4 322 aa17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 SYT14Q8NB59 555 aa17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 IL17RDQ8NFM7 739 aa17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 OR52J3Q8NH60 311 aa17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 GTPBP3Q969Y2 492 aaKnown RBP17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 TRMT61AQ96FX7 289 aaKnown RBP17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 TMEM38BQ9NVV0 291 aa17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 ZNF224Q9NZL3 707 aa17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 ZNF346Q9UL40 294 aaKnown RBP17.46■□□□□ 0.39
CACNA2D4-215ENST00000542340 MED13LQ71F56 2210 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 UBL3O95164 117 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 GADD45GO95257 159 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 NR2C1P13056 603 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 APOBEC3AP31941 199 aaPredicted RBP17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 OMPP47874 163 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 ZNF84P51523 738 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 ATP5J2P56134 94 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 SEC23BQ15437 767 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 C10orf128Q5T292 105 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 CYP2R1Q6VVX0 501 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 YTHDF3Q7Z739 585 aaKnown RBP17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 IGFN1Q86VF2 1251 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 MUC15Q8N387 334 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 OR4K5Q8NGD3 323 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 FNDC8Q8TC99 324 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 HDAC2Q92769 488 aaKnown RBP17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 NMD3Q96D46 503 aaKnown RBP17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 FAM46AQ96IP4 442 aaKnown RBP17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 KCNK17Q96T54 332 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 ALG12Q9BV10 488 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 SEC61A2Q9H9S3 476 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 SMURF2Q9HAU4 748 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 KRCC1Q9NPI7 259 aaPredicted RBP17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 CBLN4Q9NTU7 201 aa17.45■□□□□ 0.38
CACNA2D4-215ENST00000542340 SH3PXD2BA1X283 911 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 MGRN1O60291 552 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 PTP4A3O75365 173 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 FARS2O95363 451 aaKnown RBP17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 CELA3BP08861 270 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 ATP6V1B2P21281 511 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 ACVR1BP36896 505 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 LIMS1P48059 325 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 MYBPC1Q00872 1141 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 SPIBQ01892 262 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 PIGFQ07326 219 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 NPRL3Q12980 569 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 TOP3AQ13472 1001 aaPredicted RBP17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 LCN8Q6JVE9 175 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 MYPOPQ86VE0 399 aaPredicted RBP17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 DHFR2Q86XF0 187 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 ZDHHC21Q8IVQ6 265 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 SKA3Q8IX90 412 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 OR4F15Q8NGB8 312 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 ZNF519Q8TB69 540 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 POP5Q969H6 163 aaKnown RBP17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 ZNF75AQ96N20 296 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 TSPAN32Q96QS1 320 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 NDEL1Q9GZM8 345 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 FBXL3Q9UKT7 428 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 SIGLEC7Q9Y286 467 aa17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 FLNAP21333 2647 aaKnown RBP17.44■□□□□ 0.38
CACNA2D4-215ENST00000542340 A6NIZ1 184 aa17.43■□□□□ 0.38
CACNA2D4-215ENST00000542340 PDE5AO76074 875 aa17.43■□□□□ 0.38
CACNA2D4-215ENST00000542340 CD14P08571 375 aa17.43■□□□□ 0.38
CACNA2D4-215ENST00000542340 FOSL1P15407 271 aa17.43■□□□□ 0.38
CACNA2D4-215ENST00000542340 CALCRP30988 508 aa17.43■□□□□ 0.38
CACNA2D4-215ENST00000542340 RPL4P36578 427 aaKnown RBP17.43■□□□□ 0.38
CACNA2D4-215ENST00000542340 CDKN1AP38936 164 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms