RNA–Protein interactions for RNA: ENST00000542142.1

MMP17-208, Transcript of matrix metallopeptidase 17, human

TSL 4

Gene MMP17, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMP17-208	ENST00000542142	ZNF346	Q9UL40	294 aa	Known RBP	13.63	□□□□□ -0.23
MMP17-208	ENST00000542142	ZNF503-AS2	A6NEH8	195 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142		A6NIZ1	184 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	ENTPD5	O75356	428 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	PTP4A3	O75365	173 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	KRT36	O76013	467 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	NR2C1	P13056	603 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	ZNF26	P17031	533 aa	Predicted RBP	13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	RPL4	P36578	427 aa	Known RBP	13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	CAPZA2	P47755	286 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	ZNF133	P52736	654 aa	Predicted RBP	13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	RAP1B	P61224	184 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	RAP1A	P62834	184 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	BNIP1	Q12981	228 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	PGGHG	Q32M88	737 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	FAM98B	Q52LJ0	330 aa	Known RBP	13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	PGM2L1	Q6PCE3	622 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	MDP1	Q86V88	176 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	LRRC75A-AS1	Q8N1F1	130 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	SLC22A24	Q8N4F4	322 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	NANOS1	Q8WY41	292 aa	Known RBP	13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	HDAC2	Q92769	488 aa	Known RBP	13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	NMD3	Q96D46	503 aa	Known RBP	13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	RSRC1	Q96IZ7	334 aa	Known RBP	13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	TSPAN32	Q96QS1	320 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	KCNK17	Q96T54	332 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	ALG12	Q9BV10	488 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	KATNB1	Q9BVA0	655 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	TRIM15	Q9C019	465 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	CXorf56	Q9H5V9	222 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	SMURF2	Q9HAU4	748 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	FAIM	Q9NVQ4	179 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	TMEM38B	Q9NVV0	291 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	TMCC3	Q9ULS5	477 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	AURKC	Q9UQB9	309 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	LAMP3	Q9UQV4	416 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	SIGLEC7	Q9Y286	467 aa		13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	MAP1A	P78559	2803 aa	Predicted RBP	13.62	□□□□□ -0.23
MMP17-208	ENST00000542142	UNC119B	A6NIH7	251 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142		E7EQL1	145 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	ATP6V1G2-DDX39B	F2Z307	99 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	NDUFB2	O95178	105 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	HLA-H	P01893	362 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	CRYAA	P02489	173 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	SOD3	P08294	240 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	CD14	P08571	375 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	CECR9	P0C854	216 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	OR8G3P	P0DMU2	310 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	ACVR1B	P36896	505 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	IFNGR2	P38484	337 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	ZNF84	P51523	738 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	HMGA2	P52926	109 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	ERVK-25	P63136	954 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	MYBPC1	Q00872	1141 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	CHRNB3	Q05901	458 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	GSG1	Q2KHT4	349 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	NRN1L	Q496H8	165 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	C10orf128	Q5T292	105 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	ZER1	Q7Z7L7	766 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	ARIH2OS	Q8N7S6	290 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	ZNF519	Q8TB69	540 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	FNDC8	Q8TC99	324 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	GPA33	Q99795	319 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	DHRS9	Q9BPW9	319 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	KCNS3	Q9BQ31	491 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	GRHPR	Q9UBQ7	328 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	MOK	Q9UQ07	419 aa		13.61	□□□□□ -0.23
MMP17-208	ENST00000542142	OR10H3	O60404	316 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	DNAJC8	O75937	253 aa	Predicted RBP	13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	UBL3	O95164	117 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	FARS2	O95363	451 aa	Known RBP	13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	CD79A	P11912	226 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	PAX1	P15863	534 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	FPR3	P25089	353 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	IDH3G	P51553	393 aa	Predicted RBP	13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	NKX6-1	P78426	367 aa	Predicted RBP	13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	NAAA	Q02083	359 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	CD47	Q08722	323 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	THEM4	Q5T1C6	240 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	B3GLCT	Q6Y288	498 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	SKA3	Q8IX90	412 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	IL17RD	Q8NFM7	739 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	RBP7	Q96R05	134 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	GPX7	Q96SL4	187 aa	Predicted RBP	13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	GSX2	Q9BZM3	304 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	GRIP2	Q9C0E4	1043 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	ZNF701	Q9NV72	531 aa	Predicted RBP	13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	ZNF224	Q9NZL3	707 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	ADAM18	Q9Y3Q7	739 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	LYVE1	Q9Y5Y7	322 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	ATP23	Q9Y6H3	246 aa		13.6	□□□□□ -0.23
MMP17-208	ENST00000542142	AQP12B	A6NM10	295 aa		13.59	□□□□□ -0.23
MMP17-208	ENST00000542142	OVOL3	O00110	214 aa		13.59	□□□□□ -0.23
MMP17-208	ENST00000542142	TNFRSF11B	O00300	401 aa		13.59	□□□□□ -0.23
MMP17-208	ENST00000542142	ARHGEF9	O43307	516 aa		13.59	□□□□□ -0.23
MMP17-208	ENST00000542142	MGRN1	O60291	552 aa		13.59	□□□□□ -0.23
MMP17-208	ENST00000542142	ATP5H	O75947	161 aa		13.59	□□□□□ -0.23
MMP17-208	ENST00000542142	SLC2A10	O95528	541 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms