RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 SCN2BO60939 215 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 TOXO94900 526 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 RCBTB2O95199 551 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 NUDT14O95848 222 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 IGKV1D-16P01601 117 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 CRHP06850 196 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 GUSBP08236 651 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 OR12D1P0DN82 309 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 ZNF708P17019 499 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 ZNF17P17021 662 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 TCEA1P23193 301 aaKnown RBP4.78□□□□□ -1.64
CPSF7-220ENST00000541963 ME2P23368 584 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 RANBP1P43487 201 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 STARP49675 285 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 KHKP50053 298 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 LHX2P50458 406 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 P2RX1P51575 399 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 POLR2JP52435 117 aaKnown RBP4.78□□□□□ -1.64
CPSF7-220ENST00000541963 NME5P56597 212 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 GNA13Q14344 377 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 ARHGAP11BQ3KRB8 267 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 KLHL26Q53HC5 615 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 SPANXN4Q5MJ08 99 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 CCNJQ5T5M9 372 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 EPGNQ6UW88 154 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 APOOLQ6UXV4 268 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 MEX3BQ6ZN04 569 aaKnown RBP4.78□□□□□ -1.64
CPSF7-220ENST00000541963 MSANTD1Q6ZTZ1 278 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 NCCRP1Q6ZVX7 275 aaPredicted RBP4.78□□□□□ -1.64
CPSF7-220ENST00000541963 ZNF367Q7RTV3 350 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 ANKRD46Q86W74 232 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 GRAMD2AQ8IUY3 354 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 MCEMP1Q8IX19 187 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 CLECL1Q8IZS7 167 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 RPRMLQ8N4K4 120 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 ZNF614Q8N883 585 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 SMYD1Q8NB12 490 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 CHDHQ8NE62 594 aaPredicted RBP4.78□□□□□ -1.64
CPSF7-220ENST00000541963 OR5AK3PQ8NH89 298 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 STMN2Q93045 179 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 NEURL3Q96EH8 262 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 ITCHQ96J02 903 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 MAGEB18Q96M61 343 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 CCDC115Q96NT0 180 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 SDF2Q99470 211 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 TUBA1CQ9BQE3 449 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 SLC35A5Q9BS91 424 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 SFXN3Q9BWM7 321 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 TEX12Q9BXU0 123 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 PRRG4Q9BZD6 226 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 NMUR2Q9GZQ4 415 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 OR51I1Q9H343 314 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 PIGMQ9H3S5 423 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 RAD21L1Q9H4I0 556 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 CACYBPQ9HB71 228 aaKnown RBP4.78□□□□□ -1.64
CPSF7-220ENST00000541963 FANCFQ9NPI8 374 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 TIGARQ9NQ88 270 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 TCF7L2Q9NQB0 619 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 POLE3Q9NRF9 147 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 HIF1ANQ9NWT6 349 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 THUMPD1Q9NXG2 353 aaKnown RBP4.78□□□□□ -1.64
CPSF7-220ENST00000541963 NKIRAS2Q9NYR9 191 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 PTTG2Q9NZH5 202 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 OR6C3Q9NZP0 311 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 FLRT3Q9NZU0 649 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 LIPT1Q9Y234 373 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 VDAC3Q9Y277 283 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 ZNF337Q9Y3M9 751 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 WDR45Q9Y484 360 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 DNAJC13O75165 2243 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 DIDO1Q9BTC0 2240 aaKnown RBP4.78□□□□□ -1.64
CPSF7-220ENST00000541963 NCKAP5O14513 1909 aa4.78□□□□□ -1.64
CPSF7-220ENST00000541963 NCOA6Q14686 2063 aaPredicted RBP4.77□□□□□ -1.65
CPSF7-220ENST00000541963 HIVEP3Q5T1R4 2406 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF407Q9C0G0 2248 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 ARHGAP21Q5T5U3 1957 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 A0A1W2PQ09 198 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 OR2M5A3KFT3 312 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 SERINC4A6NH21 518 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 SLC22A20A6NK97 555 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 A8MZ25 164 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 GMFGO60234 142 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 CCDC22O60826 627 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 PFDN1O60925 122 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 SYNGR4O95473 234 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 CSTAP01040 98 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 PABPC4LP0CB38 370 aaKnown RBP4.77□□□□□ -1.65
CPSF7-220ENST00000541963 ZCCHC18P0CG32 403 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 NR2F1P10589 423 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 UQCRBP14927 111 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 PGCP20142 388 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 FKBP2P26885 142 aaKnown RBP4.77□□□□□ -1.65
CPSF7-220ENST00000541963 SLC6A8P48029 635 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 CAMPP49913 170 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 ASCL1P50553 236 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 AQP5P55064 265 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 CLDN18P56856 261 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 B3GALT5-AS1P59052 145 aa4.77□□□□□ -1.65
CPSF7-220ENST00000541963 CYLC2Q14093 348 aaPredicted RBP4.77□□□□□ -1.65
CPSF7-220ENST00000541963 ZNF141Q15928 474 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms