RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 DMAP1Q9NPF5 467 aaPredicted RBP3.68□□□□□ -1.82
YBX3-210ENST00000540975 KLHL28Q9NXS3 571 aa3.68□□□□□ -1.82
YBX3-210ENST00000540975 CTSFQ9UBX1 484 aa3.68□□□□□ -1.82
YBX3-210ENST00000540975 CYB5R1Q9UHQ9 305 aa3.68□□□□□ -1.82
YBX3-210ENST00000540975 ENOPH1Q9UHY7 261 aa3.68□□□□□ -1.82
YBX3-210ENST00000540975 MAD1L1Q9Y6D9 718 aa3.68□□□□□ -1.82
YBX3-210ENST00000540975 ABCC6O95255 1503 aa3.68□□□□□ -1.82
YBX3-210ENST00000540975 SYCP2Q9BX26 1530 aa3.68□□□□□ -1.82
YBX3-210ENST00000540975 KDM6AO15550 1401 aaPredicted RBP3.68□□□□□ -1.82
YBX3-210ENST00000540975 MADDQ8WXG6 1647 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.67□□□□□ -1.82
YBX3-210ENST00000540975 A0A075B6Q4 140 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 PSMB11A5LHX3 300 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 PCP4L1A6NKN8 68 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 WRBO00258 174 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 SLC9A3R1O14745 358 aaPredicted RBP3.67□□□□□ -1.82
YBX3-210ENST00000540975 MAGEB4O15481 346 aaPredicted RBP3.67□□□□□ -1.82
YBX3-210ENST00000540975 ZSCAN12O43309 604 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 TRAF3IP2O43734 574 aaPredicted RBP3.67□□□□□ -1.82
YBX3-210ENST00000540975 CCNB2O95067 398 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 NSA2O95478 260 aaKnown RBP3.67□□□□□ -1.82
YBX3-210ENST00000540975 CAPN1P07384 714 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 TFPTP0C1Z6 253 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 UQCRFS1P1P0C7P4 283 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 RAB4AP20338 218 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 HNRNPA2B1P22626 353 aaKnown RBP3.67□□□□□ -1.82
YBX3-210ENST00000540975 HOXA9P31269 272 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 EPHX2P34913 555 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 NUDT1P36639 197 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 RPS10P46783 165 aaKnown RBP3.67□□□□□ -1.82
YBX3-210ENST00000540975 PPOXP50336 477 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 RAP1GDS1P52306 607 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 TSC22D1Q15714 1073 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 NDUFA9Q16795 377 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 TFDP3Q5H9I0 405 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 ZNF311Q5JNZ3 666 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 CYB5R2Q6BCY4 276 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 AFTPHQ6ULP2 937 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 CES3Q6UWW8 571 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 FAM122BQ7Z309 247 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 DCXRQ7Z4W1 244 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 BIVMQ86UB2 503 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 KDM8Q8N371 416 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 ARIH2OSQ8N7S6 290 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 ASCC1Q8N9N2 400 aaKnown RBP3.67□□□□□ -1.82
YBX3-210ENST00000540975 FNDC5Q8NAU1 212 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 CNIH3Q8TBE1 160 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 M1APQ8TC57 530 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 CD300LFQ8TDQ1 290 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 PAQR8Q8TEZ7 354 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 ZNF707Q96C28 371 aaPredicted RBP3.67□□□□□ -1.82
YBX3-210ENST00000540975 CYP2S1Q96SQ9 504 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 PARD6GQ9BYG4 376 aaPredicted RBP3.67□□□□□ -1.82
YBX3-210ENST00000540975 POTEKPQ9BYX7 375 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 FAM192AQ9GZU8 254 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 HDHD2Q9H0R4 259 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 BLZF1Q9H2G9 400 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 OR51B5Q9H339 312 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 MRPS30Q9NP92 439 aaKnown RBP3.67□□□□□ -1.82
YBX3-210ENST00000540975 MMP26Q9NRE1 261 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 YAE1D1Q9NRH1 226 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 WRAP73Q9P2S5 460 aaPredicted RBP3.67□□□□□ -1.82
YBX3-210ENST00000540975 FOXJ3Q9UPW0 622 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 PTCH1Q13635 1447 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 VWDEQ8N2E2 1590 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 UGGT1Q9NYU2 1555 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 CEP152O94986 1710 aa3.67□□□□□ -1.82
YBX3-210ENST00000540975 CDK12Q9NYV4 1490 aaPredicted RBP3.67□□□□□ -1.82
YBX3-210ENST00000540975 KIF24Q5T7B8 1368 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 ABCC1P33527 1531 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 CHD2O14647 1828 aaKnown RBP3.66□□□□□ -1.82
YBX3-210ENST00000540975 A0A1B0GVL5 298 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 RAB19A4D1S5 217 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 BTBD17A6NE02 478 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 TMEM114B3SHH9 223 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 FCN1O00602 326 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 RASGRF2O14827 1237 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 NDUFS6O75380 124 aaKnown RBP3.66□□□□□ -1.82
YBX3-210ENST00000540975 PSIP1O75475 530 aaKnown RBP3.66□□□□□ -1.82
YBX3-210ENST00000540975 ATP6V1G2O95670 118 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 COX5BP10606 129 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 TNNI3P19429 210 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 DPP4P27487 766 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 LCN1P31025 176 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 SLC1A1P43005 524 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 KIR3DL2P43630 455 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 GPR4P46093 362 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 GNG10P50151 68 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 SERPINB9P50453 376 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 CRYBB1P53674 252 aaPredicted RBP3.66□□□□□ -1.82
YBX3-210ENST00000540975 RAB4BP61018 213 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 SKP1P63208 163 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 SPIBQ01892 262 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 C2orf54Q08AI8 447 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 SRSF5Q13243 272 aaKnown RBP3.66□□□□□ -1.82
YBX3-210ENST00000540975 EBI3Q14213 229 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 ANGPT1Q15389 498 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 ADPRMQ3LIE5 342 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 XKR4Q5GH76 650 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 CDKL4Q5MAI5 379 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms