RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 OR2T27Q8NH04 317 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 MOSPD2Q8NHP6 518 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 MFSD8Q8NHS3 518 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 AP3S1Q92572 193 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 HGDQ93099 445 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 OTULINQ96BN8 352 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 THOC3Q96J01 351 aaKnown RBP7.5□□□□□ -1.21
CHD4-208ENST00000540960 LMF1Q96S06 567 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 CNN2Q99439 309 aaKnown RBP7.5□□□□□ -1.21
CHD4-208ENST00000540960 TEAD3Q99594 435 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 VKORC1Q9BQB6 163 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 MESP1Q9BRJ9 268 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 WDR12Q9GZL7 423 aaKnown RBP7.5□□□□□ -1.21
CHD4-208ENST00000540960 TRIM36Q9NQ86 728 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 C20orf141Q9NUB4 165 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 ASB6Q9NWX5 421 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 MRPL39Q9NYK5 338 aaKnown RBP7.5□□□□□ -1.21
CHD4-208ENST00000540960 CCDC59Q9P031 241 aaKnown RBP7.5□□□□□ -1.21
CHD4-208ENST00000540960 CHRNA9Q9UGM1 479 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 OSGIN1Q9UJX0 560 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 STUB1Q9UNE7 303 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 B3GALT5Q9Y2C3 310 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 TMED7Q9Y3B3 224 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 WIF1Q9Y5W5 379 aa7.5□□□□□ -1.21
CHD4-208ENST00000540960 CPAMD8Q8IZJ3 1885 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 TRAV17A0A0B4J275 112 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 A0A1W2PRG6 482 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 LINC01387J3KSC0 135 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 WWP2O00308 870 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 SUSD5O60279 629 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 OR2J2O76002 312 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 PPP1R3DO95685 299 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 PTHP01270 115 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 IGFBP1P08833 259 aaPredicted RBP7.49□□□□□ -1.21
CHD4-208ENST00000540960 COX6A1P12074 109 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 CPEP16870 476 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 CFL1P23528 166 aaKnown RBP7.49□□□□□ -1.21
CHD4-208ENST00000540960 GABRA5P31644 462 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 UQCRC1P31930 480 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 SLC16A1P53985 500 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 GALEQ14376 348 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 GGTLC2Q14390 218 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 ZNF846Q147U1 533 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 ZNF829Q3KNS6 432 aaPredicted RBP7.49□□□□□ -1.21
CHD4-208ENST00000540960 ZNF791Q3KP31 576 aaPredicted RBP7.49□□□□□ -1.21
CHD4-208ENST00000540960 KLHL12Q53G59 568 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 C1orf140Q5VVS0 124 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 SLC22A10Q63ZE4 541 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 PLEKHG7Q6ZR37 379 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 FGD2Q7Z6J4 655 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 SYS1Q8N2H4 156 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 MS4A15Q8N5U1 240 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 GATSQ8NAP1 163 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 SLC37A3Q8NCC5 494 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 ADPRHL1Q8NDY3 354 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 OR52E2Q8NGJ4 325 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 OR5M3Q8NGP4 307 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 OR5J2Q8NH18 312 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 PHYHIPQ92561 330 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 BORCS5Q969J3 196 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 SH3YL1Q96HL8 342 aaPredicted RBP7.49□□□□□ -1.21
CHD4-208ENST00000540960 GPR137Q96N19 417 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 RASL10BQ96S79 203 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 PLEKHF2Q9H8W4 249 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 HINT3Q9NQE9 182 aaKnown RBP7.49□□□□□ -1.21
CHD4-208ENST00000540960 INIPQ9NRY2 104 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 NDUFB11Q9NX14 153 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 BABAM2Q9NXR7 383 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 IER3IP1Q9Y5U9 82 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 PEX16Q9Y5Y5 336 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 HS3ST3B1Q9Y662 390 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 USF3Q68DE3 2245 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 SCN3AQ9NY46 2000 aa7.49□□□□□ -1.21
CHD4-208ENST00000540960 ABCA1O95477 2261 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 IGKV1D-42A0A075B6H8 117 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 TRAV27A0A087WT01 109 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 IGHV3-20A0A0C4DH32 117 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 A0A1W2PPW3 197 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 A6NNC1 897 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 BLOC1S5-TXNDC5H3BN57 136 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 DNPH1O43598 174 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 ITGA10O75578 1167 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 GLCEO94923 617 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 P04436 131 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 CD1AP06126 327 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 SBK2P0C263 348 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 PRKCAP17252 672 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 EGR1P18146 543 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 FUT4P22083 530 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 CRABP1P29762 137 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 IDUAP35475 653 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 DIO1P49895 249 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 GBX2P52951 348 aaPredicted RBP7.48□□□□□ -1.21
CHD4-208ENST00000540960 FBXW4P57775 412 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 MLF1P58340 268 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 CTXN1P60606 82 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 PLAURQ03405 335 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 ZP4Q12836 540 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 KRR1Q13601 381 aaKnown RBP7.48□□□□□ -1.21
CHD4-208ENST00000540960 TSTQ16762 297 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms