RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SLC35F4A4IF30 521 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 SULT2B1O00204 365 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 TNFSF11O14788 317 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 ABHD16AO95870 558 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 CELA3AP09093 270 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 OR8G3PP0DMU2 310 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 CEACAM1P13688 526 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 CD82P27701 267 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 SRD5A2P31213 254 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 STARP49675 285 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 MAP2K6P52564 334 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 TUBA1BP68363 451 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 BDH1Q02338 343 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 CAMK2BQ13554 666 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 OR1C1Q15619 314 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 ZNF404Q494X3 552 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 DMKNQ6E0U4 476 aaPredicted RBP10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 GDPGP1Q6ZNW5 385 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 TUBA1AQ71U36 451 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 DPY19L4Q7Z388 723 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 PXKQ7Z7A4 578 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 FAM83FQ8NEG4 500 aaPredicted RBP10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 SLC25A43Q8WUT9 341 aaPredicted RBP10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 SNX18Q96RF0 628 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 KCNS3Q9BQ31 491 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 TRIM36Q9NQ86 728 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 COA3Q9Y2R0 106 aaPredicted RBP10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 HDGFL3Q9Y3E1 203 aa10.96□□□□□ -0.65
AP003559.1-201ENST00000540906 CNR1P21554 472 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 SDC2P34741 201 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 CENPAP49450 140 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 CLDN15P56746 228 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 NANOS3P60323 173 aaKnown RBP10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 CAMK2DQ13557 499 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 ZNF239Q16600 458 aaKnown RBP10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 GPAT4Q86UL3 456 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 GGNQ86UU5 652 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 SNX29P2Q8IUI4 249 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 GPALPP1Q8IXQ4 340 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 ADPRHL1Q8NDY3 354 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 OR2M7Q8NG81 312 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 SNX33Q8WV41 574 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 HTRA1Q92743 480 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 ADAD1Q96M93 576 aaKnown RBP10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 INTS14Q96SY0 518 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 SPTBN2O15020 2390 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 NPIPB13A6NJU9 1138 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 AQP7P3A6NL99 342 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 NPIPB4C9JG80 1138 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 OGG1O15527 345 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 PLPP2O43688 288 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 NCR1O76036 304 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 LIPCP11150 499 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 ZNF17P17021 662 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 ALOX5APP20292 161 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 FGF9P31371 208 aaPredicted RBP10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 PTGS2P35354 604 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 SUCLG1P53597 346 aaKnown RBP10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 MFAP5Q13361 173 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 CDK5R1Q15078 307 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 SULF2Q8IWU5 870 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 SYS1Q8N2H4 156 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 GALNT16Q8N428 558 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 OR14L1PQ8NHC6 308 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 UTP23Q9BRU9 249 aaKnown RBP10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 MRPL13Q9BYD1 178 aaKnown RBP10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 FAM117AQ9C073 453 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 TPK1Q9H3S4 243 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 ZFP64Q9NPA5 681 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 CSAG2Q9Y5P2 127 aa10.95□□□□□ -0.66
AP003559.1-201ENST00000540906 CTDSP2O14595 271 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 UPK3AO75631 287 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 TRAPPC6AO75865 159 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 PMS2P2O95744 297 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 GAAP10253 952 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 ENPP1P22413 925 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 GDF1P27539 372 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 MAGEB1P43366 347 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 CD97P48960 835 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 DAP3P51398 398 aaKnown RBP10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 RPS11P62280 158 aaKnown RBP eCLIP10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 RAC1P63000 192 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 H3F3AP84243 136 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 DYNC1I2Q13409 638 aaKnown RBP10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 CARD17Q5XLA6 110 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 NR2C2APQ86WQ0 139 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 UEVLDQ8IX04 471 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 ZNF248Q8NDW4 579 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 MDS2Q8NDY4 140 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 NSMAFQ92636 917 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 GHSRQ92847 366 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 KIAA1143Q96AT1 154 aaPredicted RBP10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 FER1L6-AS2Q96M78 137 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 OR2B2Q9GZK3 357 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 C6orf62Q9GZU0 229 aaPredicted RBP10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 GALNT8Q9NY28 637 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 SLCO1C1Q9NYB5 712 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 TRAPPC4Q9Y296 219 aa10.94□□□□□ -0.66
AP003559.1-201ENST00000540906 A6NIZ1 184 aa10.93□□□□□ -0.66
AP003559.1-201ENST00000540906 FAM166BA8MTA8 275 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms