RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 ERVK13-1Q9NX77 482 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 PCDHGA9Q9Y5G4 932 aaKnown RBP12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 CSAG2Q9Y5P2 127 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 FKBP7Q9Y680 259 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 DOPEY2Q9Y3R5 2298 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 USP9XQ93008 2570 aaPredicted RBP12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 H7C1C5 153 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 EIF1AYO14602 144 aaKnown RBP12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 TRAF3IP2O43734 574 aaPredicted RBP12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 CELA3AP09093 270 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 CENPAP49450 140 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 WNT4P56705 351 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 LCN6P62502 163 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 DYNC1I2Q13409 638 aaKnown RBP12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 SPHARQ15513 63 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 PDSS1Q5T2R2 415 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 LINC00299Q6ZSB3 139 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 ZBTB46Q86UZ6 589 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 PM20D2Q8IYS1 436 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 OR6V1Q8N148 313 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 OR51L1Q8NGJ5 315 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 OR2V1Q8NHB1 315 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 ZNRF4Q8WWF5 429 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 ZMYND19Q96E35 227 aaPredicted RBP12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 KCNK17Q96T54 332 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 MGLLQ99685 303 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 ALG12Q9BV10 488 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 TSPAN10Q9H1Z9 355 aaPredicted RBP12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 PCDHGB7Q9Y5F8 929 aa12.72□□□□□ -0.37
CYB561A3-216ENST00000540755 SLC22A23A1A5C7 686 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 C12orf71A8MTZ7 269 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 DCTN6O00399 190 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 SLC22A1O15245 554 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 MRPL3P09001 348 aaKnown RBP12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 ZNF43P17038 809 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 PYCR1P32322 319 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 STARP49675 285 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 LHX2P50458 406 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 BLVRAP53004 296 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 SUCLG1P53597 346 aaKnown RBP12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 CARD18P57730 90 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 DBPQ10586 325 aaPredicted RBP12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 SLC10A1Q14973 349 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 ARMCX4Q5H9R4 360 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 HBMQ6B0K9 141 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 GPAT4Q86UL3 456 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 KLHL36Q8N4N3 616 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 ZADH2Q8N4Q0 377 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 OR6K6Q8NGW6 343 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 OR52N1Q8NH53 320 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 TXNDC15Q96J42 360 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 TSSK2Q96PF2 358 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 FUNDC2Q9BWH2 189 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 SF3B5Q9BWJ5 86 aaKnown RBP12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 SRXN1Q9BYN0 137 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 NUAK2Q9H093 628 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 SLC6A15Q9H2J7 730 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 ZDHHC11Q9H8X9 412 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 SRA1Q9HD15 236 aaKnown RBP12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 ISYNA1Q9NPH2 558 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 MED29Q9NX70 200 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 KLHL13Q9P2N7 655 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 ENPP5Q9UJA9 477 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 TUBD1Q9UJT1 453 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 B9D1Q9UPM9 204 aa12.71□□□□□ -0.38
CYB561A3-216ENST00000540755 DAPL1A0PJW8 107 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 H3BMQ9 156 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 RAMP1O60894 148 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 OR2T7P0C7T2 308 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 ZNF708P17019 499 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 KLK2P20151 261 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 ENPP1P22413 925 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 PAX7P23759 505 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 CRABP1P29762 137 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 TGFBR2P37173 567 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 LIPAP38571 399 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 BIDP55957 195 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 CLDN15P56746 228 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 CLDN18P56856 261 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 ROR2Q01974 943 aaKnown RBP12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 RUNX1T1Q06455 604 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 MLLT11Q13015 90 aaPredicted RBP12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 GALEQ14376 348 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 BCL2A1Q16548 175 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 TRILQ7L0X0 811 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 LHFPL3Q86UP9 236 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 ZNF485Q8NCK3 441 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 OR10H4Q8NGA5 316 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 OR2T27Q8NH04 317 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 OR6X1Q8NH79 312 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 OR10D3Q8NH80 312 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 CPNE4Q96A23 557 aaPredicted RBP12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 ADAD1Q96M93 576 aaKnown RBP12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 OPALINQ96PE5 141 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 MRPL13Q9BYD1 178 aaKnown RBP12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 MARCH7Q9H992 704 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 TIGARQ9NQ88 270 aa12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 CAB39Q9Y376 341 aaPredicted RBP12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 SPTAN1Q13813 2472 aaKnown RBP12.7□□□□□ -0.38
CYB561A3-216ENST00000540755 IGLV1-36A0A0B4J1U3 117 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms