RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CHMP1BQ7LBR1 199 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 SATL1Q86VE3 508 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 CPOQ8IVL8 374 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 GID4Q8IVV7 300 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 NAXEQ8NCW5 288 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 NPEPL1Q8NDH3 523 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 ATP6V1C2Q8NEY4 427 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 FNDC9Q8TBE3 224 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 RND1Q92730 232 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 HIST1H2ACQ93077 130 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 PTP4A1Q93096 173 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 KISS1RQ969F8 398 aaPredicted RBP9.42□□□□□ -0.9
ATL3-204ENST00000540699 MYDGFQ969H8 173 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 MUL1Q969V5 352 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 CPNE4Q96A23 557 aaPredicted RBP9.42□□□□□ -0.9
ATL3-204ENST00000540699 TMIGD2Q96BF3 282 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 SLC25A36Q96CQ1 311 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 RASD2Q96D21 266 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 TSPAN32Q96QS1 320 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 CDCA4Q9BXL8 241 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 ASPNQ9BXN1 380 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 SRXN1Q9BYN0 137 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 NMNAT2Q9BZQ4 307 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 NDEL1Q9GZM8 345 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 RBM38Q9H0Z9 239 aaKnown RBP9.42□□□□□ -0.9
ATL3-204ENST00000540699 CHST11Q9NPF2 352 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 TIGARQ9NQ88 270 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 Q9UFV3 132 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 SNX5Q9Y5X3 404 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 PDZD2O15018 2839 aa9.42□□□□□ -0.9
ATL3-204ENST00000540699 TEX13CA0A0J9YWL9 993 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 SMIM31A0A1B0GVY4 71 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 A0A1W2PNV4 684 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 NPIPB13A6NJU9 1138 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 FAM183AA6NL82 134 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 SNTNA6NMZ2 147 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 RIIAD1A6NNX1 92 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 HSPB2A8KAH6 182 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 NPIPB4C9JG80 1138 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 PRR23D1E9PI22 279 aaPredicted RBP9.41□□□□□ -0.9
ATL3-204ENST00000540699 MS4A18H0YCH9 400 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 IL18BPO95998 194 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 IL2RAP01589 272 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 F13BP05160 661 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 CRHP06850 196 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 PRR23D2P0DMB1 279 aaPredicted RBP9.41□□□□□ -0.9
ATL3-204ENST00000540699 ADORA3P0DMS8 318 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 TFPIP10646 304 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 NOS3P29474 1203 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 MAP2K4P45985 399 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 DIO1P49895 249 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 CDH11P55287 796 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 RIPPLY3P57055 190 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 CSNK2A1P68400 391 aaPredicted RBP9.41□□□□□ -0.9
ATL3-204ENST00000540699 H3F3AP84243 136 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.41□□□□□ -0.9
ATL3-204ENST00000540699 PMS2P3Q13401 168 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 TMED1Q13445 227 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 PON3Q15166 354 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 NEDD8Q15843 81 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 HSPB2Q16082 182 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 MS4A18Q3C1V0 323 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 GPR139Q6DWJ6 353 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 OR2A2Q6IF42 318 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 PLXDC2Q6UX71 529 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 NHLRC1Q6VVB1 395 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 H1FNTQ75WM6 255 aaPredicted RBP9.41□□□□□ -0.9
ATL3-204ENST00000540699 MEPCEQ7L2J0 689 aaKnown RBP9.41□□□□□ -0.9
ATL3-204ENST00000540699 MRGPRGQ86SM5 289 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 STX19Q8N4C7 294 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 SVOPQ8N4V2 548 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 SDR9C7Q8NEX9 313 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 OR52E2Q8NGJ4 325 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 OR52I1Q8NGK6 324 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 OR4K13Q8NH42 304 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 LILRB4Q8NHJ6 448 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 ZNF519Q8TB69 540 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 RNF128Q8TEB7 428 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 ASB5Q8WWX0 329 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 RFKQ969G6 155 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 LGALS12Q96DT0 336 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 Q96M85 177 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 OR5B2Q96R09 309 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 CCDC90BQ9GZT6 254 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 MED20Q9H944 212 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 GP6Q9HCN6 339 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 FGF20Q9NP95 211 aaPredicted RBP9.41□□□□□ -0.9
ATL3-204ENST00000540699 ACOT13Q9NPJ3 140 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 INIPQ9NRY2 104 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 COQ3Q9NZJ6 369 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 ZNF629Q9UEG4 869 aaPredicted RBP9.41□□□□□ -0.9
ATL3-204ENST00000540699 MCTS1Q9ULC4 181 aaKnown RBP9.41□□□□□ -0.9
ATL3-204ENST00000540699 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.41□□□□□ -0.9
ATL3-204ENST00000540699 B3GALT5Q9Y2C3 310 aa9.41□□□□□ -0.9
ATL3-204ENST00000540699 EXOGQ9Y2C4 368 aaKnown RBP9.41□□□□□ -0.9
ATL3-204ENST00000540699 PKDREJQ9NTG1 2253 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 ANKRD17O75179 2603 aaKnown RBP9.4□□□□□ -0.9
ATL3-204ENST00000540699 IRGMA1A4Y4 181 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 OR6C68A6NDL8 312 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 J3QRE1 110 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms