RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 SNX18Q96RF0 628 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 PARPBPQ9NWS1 579 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 PRR23D1E9PI22 279 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 MPZL2O60487 215 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 SLC43A1O75387 559 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 WBP4O75554 376 aaKnown RBP16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 RENP00797 406 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 IL2RAP01589 272 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 PRR23D2P0DMB1 279 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 CLUP10909 449 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 KIR2DL2P43627 348 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 CLRN1P58418 232 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 SIRPAP78324 504 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 FMODQ06828 376 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 LGALS3BPQ08380 585 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 PMPCAQ10713 525 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 PHYHD1Q5SRE7 291 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 AADACL4Q5VUY2 407 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 BBS1Q8NFJ9 593 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 FBLIM1Q8WUP2 373 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 OTULINQ96BN8 352 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 NMD3Q96D46 503 aaKnown RBP16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 ALG12Q9BV10 488 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 NMNAT2Q9BZQ4 307 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 RPRD1BQ9NQG5 326 aaKnown RBP16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 UBAP1Q9NZ09 502 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 DNAJC27Q9NZQ0 273 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 FOXD3Q9UJU5 478 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 NBPF19A0A087WUL8 3843 aa16.74■□□□□ 0.27
TNFRSF1A-213ENST00000540022 UTP20O75691 2785 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 IGKV1D-43A0A0B4J1Z2 117 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 DCTN6O00399 190 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 STSP08842 583 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 TMIGD3P0DMS9 266 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 CSNK1A1P48729 337 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 CASP6P55212 293 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 CDK5R2Q13319 367 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 MED21Q13503 144 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 HIST3H3Q16695 136 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 SLC25A30Q5SVS4 291 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 LAIR2Q6ISS4 152 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 CNEP1R1Q8N9A8 125 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 OR6N1Q8NGY5 312 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 PRR7Q8TB68 274 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 TMEM54Q969K7 222 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 ZFP3Q96NJ6 502 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 DMRTA2Q96SC8 542 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 NUAK2Q9H093 628 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 C12orf49Q9H741 205 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 EMC9Q9Y3B6 208 aa16.73■□□□□ 0.27
TNFRSF1A-213ENST00000540022 MYO7BQ6PIF6 2116 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 CENPBD1B2RD01 187 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 E9PLN8 166 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 AHCYL1O43865 530 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 ENTPD6O75354 484 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 UPK3AO75631 287 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 TNFSF13O75888 250 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 GYPBP06028 91 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 CTLA4P16410 223 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 PAICSP22234 425 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 OCLNQ16625 522 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 TSPO2Q5TGU0 170 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 NXNL2Q5VZ03 156 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 KRT80Q6KB66 452 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 VWA1Q6PCB0 445 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 LRFN4Q6PJG9 635 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 C20orf196Q8IYI0 205 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 OR6V1Q8N148 313 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 ZNRF4Q8WWF5 429 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 ZNF582Q96NG8 517 aaPredicted RBP16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 VKORC1Q9BQB6 163 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 SRA1Q9HD15 236 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 ASB6Q9NWX5 421 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 GLTPQ9NZD2 209 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 MEMO1Q9Y316 297 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 GTF3C1Q12789 2109 aa16.72■□□□□ 0.27
TNFRSF1A-213ENST00000540022 M0R3G1 203 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 SLC16A7O60669 478 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 IGHV3-9P01782 118 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 CRHP06850 196 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 SPI1P17947 270 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 SLC25A1P53007 311 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 ETFDHQ16134 617 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 SMN1Q16637 294 aaKnown RBP16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 THEM4Q5T1C6 240 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 RIPPLY2Q5TAB7 128 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 ZNF100Q8IYN0 542 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 OR6K3Q8NGY3 331 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 MCHR2Q969V1 340 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 APH1AQ96BI3 265 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 RBP7Q96R05 134 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 OR51V1Q9H2C8 321 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 SLCO5A1Q9H2Y9 848 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 RERGLQ9H628 205 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 SLC7A10Q9NS82 523 aa16.71■□□□□ 0.27
TNFRSF1A-213ENST00000540022 QDPRP09417 244 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 SLC2A5P22732 501 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 FMO3P31513 532 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 PYCR1P32322 319 aa16.7■□□□□ 0.26
TNFRSF1A-213ENST00000540022 OR3A2P47893 321 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms