RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 RPL27P61353 136 aaKnown RBP15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 ADAM8P78325 824 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 ZBED5Q49AG3 693 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 PIWIL3Q7Z3Z3 882 aaKnown RBP15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 CLDN22Q8N7P3 220 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 FGFBP3Q8TAT2 258 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 RADILQ96JH8 1075 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 TSPAN32Q96QS1 320 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 MUC13Q9H3R2 512 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 TMEM5Q9Y2B1 443 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 HEATR1Q9H583 2144 aaKnown RBP15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 CALCRP30988 508 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 MAGEA2P43356 314 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 CAPZA2P47755 286 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 ZNF133P52736 654 aaPredicted RBP15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 FXYD6P3P58550 94 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 ERVK-25P63136 954 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 FMODQ06828 376 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 ANKDD1AQ495B1 522 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 MTX3Q5HYI7 312 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 ZER1Q7Z7L7 766 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 SKA3Q8IX90 412 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 FAM169BQ8N8A8 192 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 WFDC11Q8NEX6 87 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 ZNF519Q8TB69 540 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 TMEM171Q8WVE6 324 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 ASB9Q96DX5 294 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 PERPQ96FX8 193 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 ZNF75AQ96N20 296 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 KCNK17Q96T54 332 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 KATNB1Q9BVA0 655 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 TMEM38BQ9NVV0 291 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 POU2F3Q9UKI9 436 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 SIGLEC7Q9Y286 467 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 ADAM18Q9Y3Q7 739 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 ITPR3Q14573 2671 aa15.91■□□□□ 0.14
SNRPA1-203ENST00000540017 CENPBD1B2RD01 187 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 OVOL3O00110 214 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 GYG2O15488 501 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 SLC2A10O95528 541 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 PATE4P0C8F1 98 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 CD79AP11912 226 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 ACVR1BP36896 505 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 IDH3GP51553 393 aaPredicted RBP15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 SMIM11AP58511 58 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 NKX6-1P78426 367 aaPredicted RBP15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 NAAAQ02083 359 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 PIGFQ07326 219 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 TAF11Q15544 211 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 C3orf36Q3SXR2 165 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 PGM2L1Q6PCE3 622 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 THSD4Q6ZMP0 1018 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 HDDC2Q7Z4H3 204 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 CCDC36Q8IYA8 594 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 SLC22A24Q8N4F4 322 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 SH3GL3Q99963 347 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 TRAF4Q9BUZ4 470 aaPredicted RBP15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 IL20RAQ9UHF4 553 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 ATP23Q9Y6H3 246 aa15.9■□□□□ 0.14
SNRPA1-203ENST00000540017 ZNF469Q96JG9 3925 aaPredicted RBP15.89■□□□□ 0.14
SNRPA1-203ENST00000540017 PAX7P23759 505 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 RPL4P36578 427 aaKnown RBP15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 PTH2RP49190 550 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 NPRL3Q12980 569 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 BNIP1Q12981 228 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 C10orf128Q5T292 105 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 FAM122BQ7Z309 247 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 DTX2Q86UW9 622 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 TGIF2LYQ8IUE0 185 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 LRRC75A-AS1Q8N1F1 130 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 DEPDC4Q8N2C3 294 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 MS4A3Q96HJ5 214 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 RSRC1Q96IZ7 334 aaKnown RBP15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 Q96M85 177 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 DHRS9Q9BPW9 319 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 BTBD10Q9BSF8 475 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 GSX2Q9BZM3 304 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 ZNF701Q9NV72 531 aaPredicted RBP15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 AURKCQ9UQB9 309 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 UGT2A1Q9Y4X1 527 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 PLCE1Q9P212 2302 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 F8P00451 2351 aa15.89■□□□□ 0.13
SNRPA1-203ENST00000540017 USF3Q68DE3 2245 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 UNC119BA6NIH7 251 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 H7C1C5 153 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 CD14P08571 375 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 PAX1P15863 534 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 CDAP32320 146 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 TTKP33981 857 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 ARR3P36575 388 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 CDKN1AP38936 164 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 GIPRP48546 466 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 HMGA2P52926 109 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 LCN6P62502 163 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 RAB1AP62820 205 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 CD47Q08722 323 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 PPP1R8Q12972 351 aaKnown RBP15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 GSG1Q2KHT4 349 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 DNAL1Q4LDG9 190 aa15.88■□□□□ 0.13
SNRPA1-203ENST00000540017 MESTQ5EB52 335 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms