RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 OR8U1Q8NH10 309 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 ZCCHC4Q9H5U6 513 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 OSGIN2Q9Y236 505 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 C4orf47A7E2U8 309 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 J3KTA2 159 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 HCRTR1O43613 425 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 PSMB5P28074 263 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 SHC1P29353 583 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 RPS25P62851 125 aaKnown RBP9.83□□□□□ -0.84
CLIP1-209ENST00000537178 ZNF813Q6ZN06 617 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 ENTHD1Q8IYW4 607 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 OR5K2Q8NHB8 316 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 SLC38A5Q8WUX1 472 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 KCNJ15Q99712 375 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 EMC7Q9NPA0 242 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 RNF186Q9NXI6 227 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 PRSS21Q9Y6M0 314 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 ARID1BQ8NFD5 2236 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-209ENST00000537178 PAPLNO95428 1278 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 ATP1B1P05026 303 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 CD14P08571 375 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 PTAFRP25105 342 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 PXNP49023 591 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-209ENST00000537178 FLI1Q01543 452 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-209ENST00000537178 LAX1Q8IWV1 398 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 PRSS35Q8N3Z0 413 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 OR51A4Q8NGJ6 313 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 UGT2A1Q9Y4X1 527 aa9.83□□□□□ -0.84
CLIP1-209ENST00000537178 TMED7-TICAM2A0A0A6YYA0 188 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 A0A0U1RQS6 177 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 KIR2DS1A0A191URI9 304 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 OR5H15A6NDH6 313 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 OR5H14A6NHG9 310 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 OR5H1A6NKK0 313 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 LRRC30A6NM36 301 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 ZNF587BE7ETH6 402 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 APEX1P27695 318 aaKnown RBP9.82□□□□□ -0.84
CLIP1-209ENST00000537178 KIR2DS4P43632 304 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 NDUFA6P56556 154 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 EDDM3BP56851 147 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 MRPS21P82921 87 aaKnown RBP9.82□□□□□ -0.84
CLIP1-209ENST00000537178 KIR2DS1Q14954 304 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 DPY19L2P2Q6ZN68 376 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 ADGRE4PQ86SQ3 457 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 TMEM217Q8N7C4 229 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 LIPHQ8WWY8 451 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 MARC2Q969Z3 335 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 ZNF775Q96BV0 537 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-209ENST00000537178 LRFN5Q96NI6 719 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 GALNT9Q9HCQ5 603 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 GPR55Q9Y2T6 319 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-209ENST00000537178 TMED7Q9Y3B3 224 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 NPFFR2Q9Y5X5 522 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 LTBP4Q8N2S1 1624 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 J3QR89 54 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 HSPB6O14558 160 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 DEFA4P12838 97 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 GLB1P16278 677 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 CEBPBP17676 345 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 CCR9P51686 369 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 SUB1P53999 127 aaKnown RBP eCLIP9.82□□□□□ -0.84
CLIP1-209ENST00000537178 BIDP55957 195 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 GABREP78334 506 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 ALKBH1Q13686 389 aaKnown RBP9.82□□□□□ -0.84
CLIP1-209ENST00000537178 CRMP1Q14194 572 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 CLLU1OSQ5K130 101 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 DCAF12Q5T6F0 453 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 Q6ZRG5 221 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 CLEC14AQ86T13 490 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 FAM3DQ96BQ1 224 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 LCORQ96JN0 433 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-209ENST00000537178 HRASLS5Q96KN8 279 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 MED20Q9H944 212 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 GMPR2Q9P2T1 348 aaKnown RBP9.82□□□□□ -0.84
CLIP1-209ENST00000537178 DUSP13Q9UII6 198 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 EMCNQ9ULC0 261 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 TMEM200CA6NKL6 621 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 H7C1C5 153 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 TIMP1P01033 207 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 CT45A10P0DMU9 189 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 CBR1P16152 277 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 ENPP1P22413 925 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 HTR1FP30939 366 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 LCN6P62502 163 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 ERV3-1Q14264 604 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 FCN2Q15485 313 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 SYT13Q7L8C5 426 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 OVCH1Q7RTY7 1134 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 CATSPERDQ86XM0 798 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 C19orf47Q8N9M1 422 aaKnown RBP9.82□□□□□ -0.84
CLIP1-209ENST00000537178 OR10R2Q8NGX6 335 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 OR4Q3Q8NH05 313 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 HSD17B8Q92506 261 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 SLC22A12Q96S37 553 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 INSM2Q96T92 566 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-209ENST00000537178 SIAEQ9HAT2 523 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 NECAP2Q9NVZ3 263 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 SPHK1Q9NYA1 384 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 GAB2Q9UQC2 676 aa9.82□□□□□ -0.84
CLIP1-209ENST00000537178 SCN4AP35499 1836 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms