RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 DGCR6Q14129 220 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 HIST3H3Q16695 136 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 FGD3Q5JSP0 725 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 C1QTNF12Q5T7M4 302 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 CYP2R1Q6VVX0 501 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 OAFQ86UD1 273 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 CYP4Z1Q86W10 505 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 SKA3Q8IX90 412 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 RNF113BQ8IZP6 322 aaKnown RBP11.43□□□□□ -0.58
PRKDC-206ENST00000536429 MUC15Q8N387 334 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 FAM169BQ8N8A8 192 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 OR52J3Q8NH60 311 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 NMD3Q96D46 503 aaKnown RBP11.43□□□□□ -0.58
PRKDC-206ENST00000536429 FAM46AQ96IP4 442 aaKnown RBP11.43□□□□□ -0.58
PRKDC-206ENST00000536429 DHRS1Q96LJ7 313 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 ZNF75AQ96N20 296 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 GPA33Q99795 319 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 SMR3AQ99954 134 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 SH3GL3Q99963 347 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 FUZQ9BT04 418 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 KATNB1Q9BVA0 655 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 GSX1Q9H4S2 264 aaPredicted RBP11.43□□□□□ -0.58
PRKDC-206ENST00000536429 TMEM38BQ9NVV0 291 aa11.43□□□□□ -0.58
PRKDC-206ENST00000536429 GDF2Q9UK05 429 aaPredicted RBP11.43□□□□□ -0.58
PRKDC-206ENST00000536429 ZNF346Q9UL40 294 aaKnown RBP11.43□□□□□ -0.58
PRKDC-206ENST00000536429 FAM32AQ9Y421 112 aaKnown RBP11.43□□□□□ -0.58
PRKDC-206ENST00000536429 ZANQ9Y493 2812 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 SETD2Q9BYW2 2564 aaPredicted RBP11.42□□□□□ -0.58
PRKDC-206ENST00000536429 IGHV2OR16-5A0A0B4J2B6 119 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 ARHGEF9O43307 516 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 IGHV4-39P01824 125 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 CALB2P22676 271 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 OMPP47874 163 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 LIMS1P48059 325 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 DAP3P51398 398 aaKnown RBP11.42□□□□□ -0.58
PRKDC-206ENST00000536429 MNAT1P51948 309 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 CTXN1P60606 82 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 C3orf36Q3SXR2 165 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 AGAP6Q5VW22 663 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 PRSS57Q6UWY2 283 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 TMPRSS11FQ6ZWK6 438 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 DEPDC4Q8N2C3 294 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 SLC22A24Q8N4F4 322 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 CLPTM1LQ96KA5 538 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 TSPAN32Q96QS1 320 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 TXNIPQ9H3M7 391 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 ANKRD19PQ9H560 264 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 NDE1Q9NXR1 346 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 UGT2A1Q9Y4X1 527 aa11.42□□□□□ -0.58
PRKDC-206ENST00000536429 HTR3EA5X5Y0 456 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 NPIPB13A6NJU9 1138 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 NPIPB4C9JG80 1138 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 TMCC2O75069 709 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 IGHMP01871 453 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 CRYAAP02489 173 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 ZNF14P17017 642 aaPredicted RBP11.41□□□□□ -0.58
PRKDC-206ENST00000536429 CDAP32320 146 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 ARR3P36575 388 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 GIPRP48546 466 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 PTDSS1P48651 473 aaKnown RBP11.41□□□□□ -0.58
PRKDC-206ENST00000536429 RPL27P61353 136 aaKnown RBP11.41□□□□□ -0.58
PRKDC-206ENST00000536429 ERVK-25P63136 954 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 MS4A2Q01362 244 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 GSG1Q2KHT4 349 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 MST1LQ2TV78 715 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 ZNF544Q6NX49 715 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 VHLLQ6RSH7 139 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 ZNF584Q8IVC4 421 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 CCDC36Q8IYA8 594 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 FBXL14Q8N1E6 418 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 OR4K5Q8NGD3 323 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 ZNF519Q8TB69 540 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 BCAS4Q8TDM0 211 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 NSMAFQ92636 917 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 KCNK17Q96T54 332 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 CACNG6Q9BXT2 260 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 GRIP2Q9C0E4 1043 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 CBLN4Q9NTU7 201 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 FAIMQ9NVQ4 179 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 TAS2R1Q9NYW7 299 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 IL20RAQ9UHF4 553 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 ADAM18Q9Y3Q7 739 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 NF1P21359 2839 aa11.41□□□□□ -0.58
PRKDC-206ENST00000536429 CSPG4Q6UVK1 2322 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 TCRBV5S2A0A599 114 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 SH3PXD2BA1X283 911 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 H7C1C5 153 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 H7C1Q1 480 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 IMPA2O14732 288 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 PTP4A3O75365 173 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 FABP3P05413 133 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 APOBEC3AP31941 199 aaPredicted RBP11.4□□□□□ -0.58
PRKDC-206ENST00000536429 ACVR1BP36896 505 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 SLC9A3P48764 834 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 ZNF133P52736 654 aaPredicted RBP11.4□□□□□ -0.58
PRKDC-206ENST00000536429 FXYD6P3P58550 94 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 LCN6P62502 163 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 RAB1AP62820 205 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 SPIBQ01892 262 aa11.4□□□□□ -0.58
PRKDC-206ENST00000536429 CD47Q08722 323 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms