RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 APLNRP35414 380 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ZNF84P51523 738 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 LMO4P61968 165 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SCARB2Q14108 478 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SLC35D2Q76EJ3 337 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SLC16A14Q7RTX9 510 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ARMC8Q8IUR7 673 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SKA3Q8IX90 412 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 RAB1CQ92928 201 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MAELQ96JY0 434 aaKnown RBP11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ZNF75AQ96N20 296 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MOGAT1Q96PD6 335 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SLC6A7Q99884 636 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 GAL3ST1Q99999 423 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 TMEM43Q9BTV4 400 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 BCL2L14Q9BZR8 327 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 PAIP1Q9H074 479 aaKnown RBP11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 KCNN2Q9H2S1 579 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 DDX28Q9NUL7 540 aaKnown RBP11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 NKIRAS1Q9NYS0 192 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 GLTPQ9NZD2 209 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ZNF224Q9NZL3 707 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ANGPT4Q9Y264 503 aa11.09□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ISPDA4D126 451 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 EVPLLA8MZ36 301 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 MCIDASD6RGH6 385 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 LRRN3E7EW58 273 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 PLPP2O43688 288 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 SNNO75324 88 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CLPTM1O96005 669 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 HIST1H2ABP04908 130 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 PATE4P0C8F1 98 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 UMPSP11172 480 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 EGR1P18146 543 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 GATA3P23771 443 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 AQP1P29972 269 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CRYBB2P43320 205 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ARFIP2P53365 341 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CDH12P55289 794 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CLRN1P58418 232 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 HSF2Q03933 536 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 GLO1Q04760 184 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 MPP2Q14168 576 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 USP51Q70EK9 711 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 HIST3H2AQ7L7L0 130 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 RETREG3Q86VR2 466 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ZNF584Q8IVC4 421 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CPEB3Q8NE35 698 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 OR6X1Q8NH79 312 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ZNF519Q8TB69 540 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ST7LQ8TDW4 575 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 HIST1H2ACQ93077 130 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ZBTB9Q96C00 473 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ELMOD3Q96FG2 381 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 SH3GL3Q99963 347 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 NTN4Q9HB63 628 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 G6PC2Q9NQR9 355 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 TMEM38BQ9NVV0 291 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 WIPI2Q9Y4P8 454 aa11.08□□□□□ -0.64
TNFRSF1A-207ENST00000535958 PLSCR5A0PG75 271 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 TMEM120BA0PK00 339 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 POLR3GO15318 223 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 DHHO43323 396 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 SNAP29O95721 258 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 IGHG1P01857 330 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CCL2P13500 99 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ADRA2CP18825 462 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CCNOP22674 350 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 GCH1P30793 250 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 SLC3A1Q07837 685 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ZP4Q12836 540 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 MELKQ14680 651 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 TSTQ16762 297 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 AWAT1Q58HT5 328 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ZNF613Q6PF04 617 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 TTC33Q6PID6 262 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 UNQ6126/PRO20091Q6UXV3 157 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 HDDC2Q7Z4H3 204 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 NANOGNBQ7Z5D8 188 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 RBM15BQ8NDT2 890 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 HIPK4Q8NE63 616 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 OR4K5Q8NGD3 323 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 TMEM54Q969K7 222 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 SLC25A44Q96H78 314 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 OR52B2Q96RD2 323 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 MCHR1Q99705 422 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 TMPRSS13Q9BYE2 586 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 C7orf69Q9H7B7 122 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 NANSQ9NR45 359 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 NKIRAS2Q9NYR9 191 aa11.07□□□□□ -0.64
TNFRSF1A-207ENST00000535958 TENM1Q9UKZ4 2725 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 IGLV3-9A0A075B6K5 115 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 KPNA4O00629 521 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CHP2O43745 196 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 TPST1O60507 370 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 PRSS23O95084 383 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 CH25HO95992 272 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 IGHV2-5P01817 119 aa11.06□□□□□ -0.64
TNFRSF1A-207ENST00000535958 ZNF250P15622 560 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms