RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	MYEF2	Q9P2K5	600 aa	Known RBP	3.78	□□□□□ -1.8
ATM-223	ENST00000533979	NTNG1	Q9Y2I2	539 aa		3.78	□□□□□ -1.8
ATM-223	ENST00000533979	KDM3B	Q7LBC6	1761 aa		3.78	□□□□□ -1.8
ATM-223	ENST00000533979	AFDN	P55196	1824 aa	Known RBP	3.77	□□□□□ -1.81
ATM-223	ENST00000533979	USP42	Q9H9J4	1324 aa	Known RBP	3.77	□□□□□ -1.81
ATM-223	ENST00000533979	STK36	Q9NRP7	1315 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	IGHV4-4	A0A075B6R2	117 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	NSG1	A0A0A6YYJ2	146 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	TRBV9	A0A0B4J1U6	114 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	MEIOC	A2RUB1	952 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	IGLON5	A6NGN9	336 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	PP2D1	A8MPX8	630 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	PDZK1P1	A8MUH7	402 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	TRDC	B7Z8K6	153 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979		G3V2L1	256 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979		K7EQD1	137 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	FCN1	O00602	326 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	RAB29	O14966	203 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	AIRE	O43918	545 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	OR10H3	O60404	316 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	HCN1	O60741	890 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	UGT2B17	O75795	530 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	ATP5H	O75947	161 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	NUDT14	O95848	222 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	ALDOB	P05062	364 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	FCGR3A	P08637	254 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	MYL2	P10916	166 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	PRPS2	P11908	318 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	CCL5	P13501	91 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	IDO1	P14902	403 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	GATA1	P15976	413 aa	Predicted RBP	3.77	□□□□□ -1.81
ATM-223	ENST00000533979	SDC1	P18827	310 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	CCNO	P22674	350 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	FGF9	P31371	208 aa	Predicted RBP	3.77	□□□□□ -1.81
ATM-223	ENST00000533979	MMP12	P39900	470 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	NSG1	P42857	185 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	SLC1A2	P43004	574 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	MRPL19	P49406	292 aa	Known RBP	3.77	□□□□□ -1.81
ATM-223	ENST00000533979	ARRB1	P49407	418 aa	Predicted RBP	3.77	□□□□□ -1.81
ATM-223	ENST00000533979	DAP3	P51398	398 aa	Known RBP	3.77	□□□□□ -1.81
ATM-223	ENST00000533979	DHODH	Q02127	395 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	SCRN3	Q0VDG4	424 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	DPYSL3	Q14195	570 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	GRB7	Q14451	532 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	USF2	Q15853	346 aa	Predicted RBP	3.77	□□□□□ -1.81
ATM-223	ENST00000533979	FAM189A2	Q15884	450 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	TRIM16L	Q309B1	348 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	ACER2	Q5QJU3	275 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	CLEC6A	Q6EIG7	209 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	REEP3	Q6NUK4	255 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	NUFIP2	Q7Z417	695 aa	Known RBP	3.77	□□□□□ -1.81
ATM-223	ENST00000533979	HOGA1	Q86XE5	327 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	STX12	Q86Y82	276 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	CCDC71	Q8IV32	467 aa	Predicted RBP	3.77	□□□□□ -1.81
ATM-223	ENST00000533979	GPR65	Q8IYL9	337 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	TPRX1	Q8N7U7	411 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	LRRC75A	Q8NAA5	344 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	FNDC5	Q8NAU1	212 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	OR52E5	Q8NH55	327 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	ANGPTL6	Q8NI99	470 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	IL1F10	Q8WWZ1	152 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	NAT6	Q93015	286 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	MOCOS	Q96EN8	888 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	ZBED6CL	Q96FA7	236 aa	Predicted RBP	3.77	□□□□□ -1.81
ATM-223	ENST00000533979	OPALIN	Q96PE5	141 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	TRNT1	Q96Q11	434 aa	Known RBP	3.77	□□□□□ -1.81
ATM-223	ENST00000533979	OR51M1	Q9H341	326 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	LIME1	Q9H400	295 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	WDR41	Q9HAD4	459 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	CSNK1G1	Q9HCP0	422 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	ADAM22	Q9P0K1	906 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	STX18	Q9P2W9	335 aa	Known RBP	3.77	□□□□□ -1.81
ATM-223	ENST00000533979	HMGXB4	Q9UGU5	601 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	RNF24	Q9Y225	148 aa		3.77	□□□□□ -1.81
ATM-223	ENST00000533979	MRPS28	Q9Y2Q9	187 aa	Known RBP	3.77	□□□□□ -1.81
ATM-223	ENST00000533979	RBMX2	Q9Y388	322 aa	Known RBP	3.77	□□□□□ -1.81
ATM-223	ENST00000533979	ADAMTSL1	Q8N6G6	1762 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	MAPK8IP3	Q9UPT6	1336 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	TCRBV9S1A1T	A0A576	114 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	MEX3A	A1L020	520 aa	Known RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	SAGE2P	A6NJ88	616 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	IDS	B3KWA1	339 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	SIRPB1	O00241	398 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	HSD17B6	O14756	317 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	HAT1	O14929	419 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	PRKY	O43930	277 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	CBR3	O75828	277 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	NXPH4	O95158	308 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	LYPD3	O95274	346 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	PIGR	P01833	764 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	HLA-DRA	P01903	254 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	GLA	P06280	429 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	DCN	P07585	359 aa	Known RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	RET	P07949	1114 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	COX5A	P20674	150 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	BCKDHB	P21953	392 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	VHL	P40337	213 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	NAA10	P41227	235 aa	Predicted RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	TSFM	P43897	325 aa	Known RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	CBX5	P45973	191 aa		3.76	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms