RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 TRAV27A0A087WT01 109 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 A0A1W2PRQ8 180 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 CENPBD1B2RD01 187 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 DHHO43323 396 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 TRMUO75648 421 aaKnown RBP13.36□□□□□ -0.27
CPSF1-210ENST00000532935 DIRAS1O95057 198 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 QDPRP09417 244 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 CD79AP11912 226 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 ACADSP16219 412 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 ARR3P36575 388 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 GPR4P46093 362 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 SLC9A3P48764 834 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 IDH3GP51553 393 aaPredicted RBP13.36□□□□□ -0.27
CPSF1-210ENST00000532935 NPRL3Q12980 569 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 FHL1Q13642 323 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 DGCR6Q14129 220 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 HIST3H3Q16695 136 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 ARMC4Q5T2S8 1044 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 C11orf71Q6IPW1 123 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 PODNL1Q6PEZ8 512 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 RRM2BQ7LG56 351 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 PIWIL3Q7Z3Z3 882 aaKnown RBP13.36□□□□□ -0.27
CPSF1-210ENST00000532935 OAFQ86UD1 273 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 MYPOPQ86VE0 399 aaPredicted RBP13.36□□□□□ -0.27
CPSF1-210ENST00000532935 SYT14Q8NB59 555 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 NOXO1Q8NFA2 376 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 OR51A7Q8NH64 312 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 MCHR2Q969V1 340 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 ZNF347Q96SE7 839 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 SEPHS2Q99611 448 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 MMADHCQ9H3L0 296 aaPredicted RBP13.36□□□□□ -0.27
CPSF1-210ENST00000532935 TXNIPQ9H3M7 391 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 CBLN4Q9NTU7 201 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 ZNF224Q9NZL3 707 aa13.36□□□□□ -0.27
CPSF1-210ENST00000532935 STX18Q9P2W9 335 aaKnown RBP13.36□□□□□ -0.27
CPSF1-210ENST00000532935 ZANQ9Y493 2812 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 ZFHX3Q15911 3703 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 CDC42EP2O14613 210 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 SEMG1P04279 462 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 FOSL1P15407 271 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 ITGA2P17301 1181 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 CALCRP30988 508 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 APOBEC3AP31941 199 aaPredicted RBP13.35□□□□□ -0.27
CPSF1-210ENST00000532935 CTXN1P60606 82 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 MYBPC1Q00872 1141 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 PIGFQ07326 219 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 TOP3AQ13472 1001 aaPredicted RBP13.35□□□□□ -0.27
CPSF1-210ENST00000532935 TAF11Q15544 211 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 GSG1Q2KHT4 349 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 ANKDD1AQ495B1 522 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 IQCCQ4KMZ1 466 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 FGD3Q5JSP0 725 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 TMPRSS11FQ6ZWK6 438 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 IGFN1Q86VF2 1251 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 LRRC75AQ8NAA5 344 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 OR13C2Q8NGS9 318 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 NANOS1Q8WY41 292 aaKnown RBP13.35□□□□□ -0.27
CPSF1-210ENST00000532935 SLC7A6OSQ96CW6 309 aaPredicted RBP13.35□□□□□ -0.27
CPSF1-210ENST00000532935 DHRS1Q96LJ7 313 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 TNFRSF13CQ96RJ3 184 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 BTBD10Q9BSF8 475 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 NOX3Q9HBY0 568 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 TMEM38BQ9NVV0 291 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 TMEM5Q9Y2B1 443 aa13.35□□□□□ -0.27
CPSF1-210ENST00000532935 SETD2Q9BYW2 2564 aaPredicted RBP13.35□□□□□ -0.27
CPSF1-210ENST00000532935 ENTPD5O75356 428 aa13.34□□□□□ -0.27
CPSF1-210ENST00000532935 UBL3O95164 117 aa13.34□□□□□ -0.27
CPSF1-210ENST00000532935 IGHMP01871 453 aa13.34□□□□□ -0.27
CPSF1-210ENST00000532935 ZNF84P51523 738 aa13.34□□□□□ -0.27
CPSF1-210ENST00000532935 ZNF133P52736 654 aaPredicted RBP13.34□□□□□ -0.27
CPSF1-210ENST00000532935 RPL27P61353 136 aaKnown RBP13.34□□□□□ -0.27
CPSF1-210ENST00000532935 DNAL1Q4LDG9 190 aa13.34□□□□□ -0.27
CPSF1-210ENST00000532935 RINLQ6ZS11 566 aa13.34□□□□□ -0.27
CPSF1-210ENST00000532935 SKA3Q8IX90 412 aa13.34□□□□□ -0.27
CPSF1-210ENST00000532935 ARHGAP24Q8N264 748 aa13.34□□□□□ -0.27
CPSF1-210ENST00000532935 SLC22A24Q8N4F4 322 aa13.34□□□□□ -0.27
CPSF1-210ENST00000532935 IL17RDQ8NFM7 739 aa13.34□□□□□ -0.27
CPSF1-210ENST00000532935 OR4F15Q8NGB8 312 aa13.34□□□□□ -0.27
CPSF1-210ENST00000532935 HDAC2Q92769 488 aaKnown RBP13.34□□□□□ -0.27
CPSF1-210ENST00000532935 MCUR1Q96AQ8 359 aa13.34□□□□□ -0.27
CPSF1-210ENST00000532935 FAM46AQ96IP4 442 aaKnown RBP13.34□□□□□ -0.27
CPSF1-210ENST00000532935 ZNF75AQ96N20 296 aa13.34□□□□□ -0.27
CPSF1-210ENST00000532935 CACNG6Q9BXT2 260 aa13.34□□□□□ -0.27
CPSF1-210ENST00000532935 CA10Q9NS85 328 aa13.34□□□□□ -0.27
CPSF1-210ENST00000532935 IGHV2OR16-5A0A0B4J2B6 119 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 TRBV4-1A0A0J9YWV2 114 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 H0YHG0 523 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 FARS2O95363 451 aaKnown RBP13.33□□□□□ -0.28
CPSF1-210ENST00000532935 IGHV4-39P01824 125 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 FABP3P05413 133 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 OR8G3PP0DMU2 310 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 ZNF14P17017 642 aaPredicted RBP13.33□□□□□ -0.28
CPSF1-210ENST00000532935 PTDSS1P48651 473 aaKnown RBP13.33□□□□□ -0.28
CPSF1-210ENST00000532935 RAB1AP62820 205 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 SEC23BQ15437 767 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 ETFDHQ16134 617 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 ZBED5Q49AG3 693 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 C10orf128Q5T292 105 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 OR52J3Q8NH60 311 aa13.33□□□□□ -0.28
CPSF1-210ENST00000532935 FGFBP3Q8TAT2 258 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms