RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 HIST3H3Q16695 136 aa18.21■□□□□ 0.51
CCS-207ENST00000531990 RFX4Q33E94 735 aa18.21■□□□□ 0.51
CCS-207ENST00000531990 ZNF770Q6IQ21 691 aaPredicted RBP18.21■□□□□ 0.51
CCS-207ENST00000531990 RPL13AP3Q6NVV1 102 aa18.21■□□□□ 0.51
CCS-207ENST00000531990 OR10G2Q8NGC3 310 aa18.21■□□□□ 0.51
CCS-207ENST00000531990 HDAC2Q92769 488 aaKnown RBP18.21■□□□□ 0.51
CCS-207ENST00000531990 MCHR2Q969V1 340 aa18.21■□□□□ 0.51
CCS-207ENST00000531990 UTP4Q969X6 686 aaKnown RBP18.21■□□□□ 0.51
CCS-207ENST00000531990 KCNK17Q96T54 332 aa18.21■□□□□ 0.51
CCS-207ENST00000531990 FOXB1Q99853 325 aa18.21■□□□□ 0.51
CCS-207ENST00000531990 SMURF2Q9HAU4 748 aa18.21■□□□□ 0.51
CCS-207ENST00000531990 MOV10Q9HCE1 1003 aaKnown RBP18.21■□□□□ 0.51
CCS-207ENST00000531990 IL20RAQ9UHF4 553 aa18.21■□□□□ 0.51
CCS-207ENST00000531990 NOTCH2Q04721 2471 aa18.21■□□□□ 0.5
CCS-207ENST00000531990 ARPC4-TTLL3A0A0A6YYG9 625 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 ARHGEF9O43307 516 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 SEC14L2O76054 403 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 GASTP01350 101 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 CD3EP07766 207 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 SDHAP31040 664 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 CAPZA2P47755 286 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 THEM4Q5T1C6 240 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 NCMAPQ5T1S8 102 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 SEZ6L2Q6UXD5 910 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 TMEM108Q6UXF1 575 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 THSD4Q6ZMP0 1018 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 ZNF627Q7L945 461 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 OR52L1Q8NGH7 329 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 ZNF519Q8TB69 540 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 GTPBP3Q969Y2 492 aaKnown RBP18.2■□□□□ 0.5
CCS-207ENST00000531990 Q96M85 177 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 RAB3IPQ96QF0 476 aaPredicted RBP18.2■□□□□ 0.5
CCS-207ENST00000531990 NRIP3Q9NQ35 241 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 EDARQ9UNE0 448 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 AP4S1Q9Y587 144 aa18.2■□□□□ 0.5
CCS-207ENST00000531990 ARRDC5A6NEK1 342 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 M0R1B8 84 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 AHCYL1O43865 530 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 TIPRLO75663 272 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 B4GALT1P15291 398 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 IST1P53990 364 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 FXYD6P3P58550 94 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 BSPH1Q075Z2 132 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 KRR1Q13601 381 aaKnown RBP18.19■□□□□ 0.5
CCS-207ENST00000531990 ZNF620Q6ZNG0 422 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 FAM122BQ7Z309 247 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 YTHDF3Q7Z739 585 aaKnown RBP18.19■□□□□ 0.5
CCS-207ENST00000531990 NANOS1Q8WY41 292 aaKnown RBP18.19■□□□□ 0.5
CCS-207ENST00000531990 DUS3LQ96G46 650 aaKnown RBP18.19■□□□□ 0.5
CCS-207ENST00000531990 SAMD8Q96LT4 415 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 HS3ST6Q96QI5 342 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 IFT27Q9BW83 186 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 C1QTNF6Q9BXI9 259 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 DGCR6LQ9BY27 220 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 NELFAQ9H3P2 528 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 ARMC1Q9NVT9 282 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 TMEM38BQ9NVV0 291 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 NPAP1Q9NZP6 1156 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 PDP1Q9P0J1 537 aaPredicted RBP18.19■□□□□ 0.5
CCS-207ENST00000531990 RNF115Q9Y4L5 304 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 IER3IP1Q9Y5U9 82 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 CDH10Q9Y6N8 788 aa18.19■□□□□ 0.5
CCS-207ENST00000531990 FARS2O95363 451 aaKnown RBP18.18■□□□□ 0.5
CCS-207ENST00000531990 PPP1R3DO95685 299 aa18.18■□□□□ 0.5
CCS-207ENST00000531990 FCGR1AP12314 374 aa18.18■□□□□ 0.5
CCS-207ENST00000531990 APEHP13798 732 aaKnown RBP18.18■□□□□ 0.5
CCS-207ENST00000531990 PTAFRP25105 342 aa18.18■□□□□ 0.5
CCS-207ENST00000531990 LOXP28300 417 aaPredicted RBP18.18■□□□□ 0.5
CCS-207ENST00000531990 ZNF133P52736 654 aaPredicted RBP18.18■□□□□ 0.5
CCS-207ENST00000531990 MESTQ5EB52 335 aa18.18■□□□□ 0.5
CCS-207ENST00000531990 C10orf128Q5T292 105 aa18.18■□□□□ 0.5
CCS-207ENST00000531990 RASSF6Q6ZTQ3 369 aa18.18■□□□□ 0.5
CCS-207ENST00000531990 ADCK1Q86TW2 530 aa18.18■□□□□ 0.5
CCS-207ENST00000531990 C10orf67Q8IYJ2 551 aa18.18■□□□□ 0.5
CCS-207ENST00000531990 ERMAPQ96PL5 475 aaPredicted RBP18.18■□□□□ 0.5
CCS-207ENST00000531990 TEX13CA0A0J9YWL9 993 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 DPRXA6NFQ7 191 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 SOCS2O14508 198 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 IMPA2O14732 288 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 SLC2A10O95528 541 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 OR8G3PP0DMU2 310 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 FASP25445 335 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 NOS3P29474 1203 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 GUCA1AP43080 201 aaPredicted RBP18.17■□□□□ 0.5
CCS-207ENST00000531990 ACTR3P61158 418 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 TUBA1BP68363 451 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 TUBA4AP68366 448 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 FMODQ06828 376 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 COX10Q12887 443 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 ZNF704Q6ZNC4 412 aaPredicted RBP18.17■□□□□ 0.5
CCS-207ENST00000531990 TUBA1AQ71U36 451 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 NSMAFQ92636 917 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 RASD2Q96D21 266 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 NMD3Q96D46 503 aaKnown RBP18.17■□□□□ 0.5
CCS-207ENST00000531990 FEVQ99581 238 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 BDH2Q9BUT1 245 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 ZNF556Q9HAH1 456 aa18.17■□□□□ 0.5
CCS-207ENST00000531990 ANKRD17O75179 2603 aaKnown RBP18.17■□□□□ 0.5
CCS-207ENST00000531990 HRNRQ86YZ3 2850 aaPredicted RBP18.16■□□□□ 0.5
CCS-207ENST00000531990 PRSS37A4D1T9 235 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms