RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 RPS7P62081 194 aaKnown RBP16.86■□□□□ 0.29
SMPD1-205ENST00000531303 SMN1Q16637 294 aaKnown RBP16.86■□□□□ 0.29
SMPD1-205ENST00000531303 PHYHD1Q5SRE7 291 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 NSMAFQ92636 917 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 ZNF582Q96NG8 517 aaPredicted RBP16.86■□□□□ 0.29
SMPD1-205ENST00000531303 FOXN4Q96NZ1 517 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 RBP7Q96R05 134 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 MRPL13Q9BYD1 178 aaKnown RBP16.86■□□□□ 0.29
SMPD1-205ENST00000531303 GP6Q9HCN6 339 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 ASB6Q9NWX5 421 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 VSX1Q9NZR4 365 aaPredicted RBP16.86■□□□□ 0.29
SMPD1-205ENST00000531303 EMC9Q9Y3B6 208 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 KMT2BQ9UMN6 2715 aaPredicted RBP16.86■□□□□ 0.29
SMPD1-205ENST00000531303 UPK3AO75631 287 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 SMNDC1O75940 238 aaKnown RBP eCLIP16.86■□□□□ 0.29
SMPD1-205ENST00000531303 KRT33AO76009 404 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 B3GLCTQ6Y288 498 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 FAM214BQ7L5A3 538 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 OR6V1Q8N148 313 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 MARVELD2Q8N4S9 558 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 NAXEQ8NCW5 288 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 APH1AQ96BI3 265 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 ALG12Q9BV10 488 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 NUAK2Q9H093 628 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 AMBNQ9NP70 447 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 GLTPQ9NZD2 209 aa16.86■□□□□ 0.29
SMPD1-205ENST00000531303 RALYQ9UKM9 306 aaKnown RBP16.86■□□□□ 0.29
SMPD1-205ENST00000531303 IGKV1D-43A0A0B4J1Z2 117 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 B8ZZF3 427 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 DCTN6O00399 190 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 QDPRP09417 244 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 CTLA4P16410 223 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 SPI1P17947 270 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 TIMP3P35625 211 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 CA7P43166 264 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 KIR2DL2P43627 348 aaPredicted RBP16.85■□□□□ 0.29
SMPD1-205ENST00000531303 APOFQ13790 326 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 ETFDHQ16134 617 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 SOWAHCQ53LP3 525 aaPredicted RBP16.85■□□□□ 0.29
SMPD1-205ENST00000531303 AADACL4Q5VUY2 407 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 LAIR2Q6ISS4 152 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 VWA1Q6PCB0 445 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 C20orf196Q8IYI0 205 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 UBE2J2Q8N2K1 259 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 GPR137CQ8N3F9 429 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 ZNF843Q8N446 348 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 PROKR2Q8NFJ6 384 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 ZNRF4Q8WWF5 429 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 TMEM54Q969K7 222 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 SLCO5A1Q9H2Y9 848 aa16.85■□□□□ 0.29
SMPD1-205ENST00000531303 EIF4E1BA6NMX2 242 aaKnown RBP16.84■□□□□ 0.29
SMPD1-205ENST00000531303 SLC25A1P53007 311 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 GUSBP1Q15486 140 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 OCLNQ16625 522 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 EIF2S3LQ2VIR3 472 aaKnown RBP16.84■□□□□ 0.29
SMPD1-205ENST00000531303 C6orf141Q5SZD1 244 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 TSPO2Q5TGU0 170 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 LRFN4Q6PJG9 635 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 ZNF786Q8N393 782 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 BPIFB6Q8NFQ5 453 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 OR6K6Q8NGW6 343 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 OR2T4Q8NH00 348 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 FBLIM1Q8WUP2 373 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 MCHR2Q969V1 340 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 Q96MT0 163 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 ALKBH3Q96Q83 286 aaPredicted RBP16.84■□□□□ 0.29
SMPD1-205ENST00000531303 ULBP2Q9BZM5 246 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 NMNAT2Q9BZQ4 307 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 PRSS50Q9UI38 385 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 B9D1Q9UPM9 204 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 LRCH1Q9Y2L9 728 aa16.84■□□□□ 0.29
SMPD1-205ENST00000531303 E9PLN8 166 aa16.83■□□□□ 0.28
SMPD1-205ENST00000531303 CCL21O00585 134 aa16.83■□□□□ 0.28
SMPD1-205ENST00000531303 GPANK1O95872 356 aa16.83■□□□□ 0.28
SMPD1-205ENST00000531303 GNLYP22749 145 aa16.83■□□□□ 0.28
SMPD1-205ENST00000531303 CEACAM8P31997 349 aaPredicted RBP16.83■□□□□ 0.28
SMPD1-205ENST00000531303 CDH11P55287 796 aa16.83■□□□□ 0.28
SMPD1-205ENST00000531303 THEM4Q5T1C6 240 aa16.83■□□□□ 0.28
SMPD1-205ENST00000531303 MEDAGQ5VYS4 303 aa16.83■□□□□ 0.28
SMPD1-205ENST00000531303 NXNL2Q5VZ03 156 aa16.83■□□□□ 0.28
SMPD1-205ENST00000531303 MEPCEQ7L2J0 689 aaKnown RBP16.83■□□□□ 0.28
SMPD1-205ENST00000531303 BTLAQ7Z6A9 289 aa16.83■□□□□ 0.28
SMPD1-205ENST00000531303 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.83■□□□□ 0.28
SMPD1-205ENST00000531303 PRR7Q8TB68 274 aa16.83■□□□□ 0.28
SMPD1-205ENST00000531303 SNX18Q96RF0 628 aa16.83■□□□□ 0.28
SMPD1-205ENST00000531303 VKORC1Q9BQB6 163 aa16.83■□□□□ 0.28
SMPD1-205ENST00000531303 RBM24Q9BX46 236 aaKnown RBP16.83■□□□□ 0.28
SMPD1-205ENST00000531303 SLC7A10Q9NS82 523 aa16.83■□□□□ 0.28
SMPD1-205ENST00000531303 UPB1Q9UBR1 384 aa16.83■□□□□ 0.28
SMPD1-205ENST00000531303 FOXD3Q9UJU5 478 aaPredicted RBP16.83■□□□□ 0.28
SMPD1-205ENST00000531303 MEMO1Q9Y316 297 aa16.83■□□□□ 0.28
SMPD1-205ENST00000531303 A0A0G2JNJ9 132 aa16.82■□□□□ 0.28
SMPD1-205ENST00000531303 AHCYL1O43865 530 aa16.82■□□□□ 0.28
SMPD1-205ENST00000531303 XPNPEP2O43895 674 aa16.82■□□□□ 0.28
SMPD1-205ENST00000531303 KHDRBS3O75525 346 aaKnown RBP16.82■□□□□ 0.28
SMPD1-205ENST00000531303 TNFSF13O75888 250 aa16.82■□□□□ 0.28
SMPD1-205ENST00000531303 C1QL1O75973 258 aa16.82■□□□□ 0.28
SMPD1-205ENST00000531303 CRABP1P29762 137 aa16.82■□□□□ 0.28
SMPD1-205ENST00000531303 UQCRFS1P47985 274 aa16.82■□□□□ 0.28
SMPD1-205ENST00000531303 HIST3H3Q16695 136 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms