RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 ZNF587BE7ETH6 402 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 EMC8O43402 210 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 SPRY1O43609 319 aaPredicted RBP4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 PLPP2O43688 288 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 SCO2O43819 266 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 PCDH7O60245 1069 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 PDYNP01213 254 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 KRT6AP02538 564 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 KRT6BP04259 564 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 INHBAP08476 426 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 RPS17P08708 135 aaKnown RBP4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 CT45A8P0DMV1 189 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 CT45A9P0DMV2 189 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 TBXA2RP21731 343 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 EVI2BP34910 448 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 APOBEC1P41238 236 aaKnown RBP4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 KRT6CP48668 564 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 CLK1P49759 484 aaKnown RBP4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 GAS1P54826 345 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 B3GALT5-AS1P59052 145 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 GUCY2DQ02846 1103 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 RUNX1T1Q06455 604 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 HEPACAMQ14CZ8 416 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 PON3Q15166 354 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 SPIN4Q56A73 249 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 CT45A2Q5DJT8 189 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 BEX5Q5H9J7 111 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 RUSC1-AS1Q66K80 236 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 PLEKHM3Q6ZWE6 761 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 ZNF550Q7Z398 422 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 CENPVQ7Z7K6 275 aaPredicted RBP4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 FAM9CQ8IZT9 166 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 CIARTQ8N365 385 aaPredicted RBP4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 C1orf52Q8N6N3 182 aaKnown RBP4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 FADS6Q8N9I5 356 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 OR1J2Q8NGS2 313 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 OR9A2Q8NGT5 310 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 OR5R1Q8NH85 324 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 BBS10Q8TAM1 723 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 RNF138Q8WVD3 245 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 FIG4Q92562 907 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 EXOSC8Q96B26 276 aaKnown RBP4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 EFHD2Q96C19 240 aaPredicted RBP4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 VSTM2LQ96N03 204 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 MRPL57Q9BQC6 102 aaKnown RBP4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 PIGQQ9BRB3 760 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 PINK1Q9BXM7 581 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 SHCBP1LQ9BZQ2 653 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 MMADHCQ9H3L0 296 aaPredicted RBP4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 DSN1Q9H410 356 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 RNF122Q9H9V4 155 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 FOLH1BQ9HBA9 442 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 FARSBQ9NSD9 589 aaKnown RBP4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 VPS29Q9UBQ0 182 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 MRTO4Q9UKD2 239 aaKnown RBP4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 ABCG2Q9UNQ0 655 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 LIPT1Q9Y234 373 aa4.46□□□□□ -1.7
AMBRA1-209ENST00000529963 SAA2-SAA4A0A096LPE2 208 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 GNG14A0A1W2PPG7 69 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 OR2M5A3KFT3 312 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 A8MT66 165 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 MANBAO00462 879 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 PLGP00747 810 aaPredicted RBP4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 CGAP01215 116 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 IL3P08700 152 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 MYOD1P15172 320 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 PAX1P15863 534 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 ITGA2P17301 1181 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 TAC1P20366 129 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 ACHEP22303 614 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 MPIP34949 423 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 PCGF2P35227 344 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 SERPINB9P50453 376 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 PSMD4P55036 377 aaKnown RBP4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 CDH13P55290 713 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 CLDN20P56880 219 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 RELQ04864 619 aaPredicted RBP4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 STX5Q13190 355 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 ZNHIT3Q15649 155 aaPredicted RBP4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 SGCBQ16585 318 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 DECR1Q16698 335 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 EXOC3L2Q2M3D2 409 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 SMU1Q2TAY7 513 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 GLYR1Q49A26 553 aaPredicted RBP4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 NPSR1Q6W5P4 371 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 ZNF704Q6ZNC4 412 aaPredicted RBP4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 OR2M3Q8NG83 312 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 FNDC9Q8TBE3 224 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 HBEGFQ99075 208 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 PRRG4Q9BZD6 226 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 ANKRA2Q9H9E1 313 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 HHATLQ9HCP6 504 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 CHMP1AQ9HD42 196 aaPredicted RBP4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 FAM120CQ9NX05 1096 aaKnown RBP4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 CHCHD3Q9NX63 227 aaKnown RBP4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 PAQR5Q9NXK6 330 aaPredicted RBP4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 MED11Q9P086 117 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 B3GALT5Q9Y2C3 310 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 STK38LQ9Y2H1 464 aa4.45□□□□□ -1.7
AMBRA1-209ENST00000529963 ZNF337Q9Y3M9 751 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms