RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	RPS6KA6	Q9UK32	745 aa		10.19	□□□□□ -0.78
PSMC3-205	ENST00000528362	ENPP4	Q9Y6X5	453 aa		10.19	□□□□□ -0.78
PSMC3-205	ENST00000528362	CSPG4	Q6UVK1	2322 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	TRAV27	A0A087WT01	109 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	FAM171A2	A8MVW0	826 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	CENPBD1	B2RD01	187 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	RNF223	E7ERA6	249 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	SSX4	O60224	188 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	DCTN3	O75935	186 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	PDE5A	O76074	875 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	OR4A8	P0C604	315 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	PATE4	P0C8F1	98 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	OR8G3P	P0DMU2	310 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	HSD17B1	P14061	328 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	ACADS	P16219	412 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	HOXB4	P17483	251 aa	Predicted RBP	10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	TCN1	P20061	433 aa	Predicted RBP	10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	GIPR	P48546	466 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	PTDSS1	P48651	473 aa	Known RBP	10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	ZNF133	P52736	654 aa	Predicted RBP	10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	NUDT6	P53370	316 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	MYBPC1	Q00872	1141 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	PRKCD	Q05655	676 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	CHRNB3	Q05901	458 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	TOP3A	Q13472	1001 aa	Predicted RBP	10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	ALG10	Q5BKT4	473 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	ZNF730	Q6ZMV8	503 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	MBOAT2	Q6ZWT7	520 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	HDDC2	Q7Z4H3	204 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	IGFN1	Q86VF2	1251 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	CYP4Z1	Q86W10	505 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	SKA3	Q8IX90	412 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	PGAM4	Q8N0Y7	254 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	ANKS4B	Q8N8V4	417 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	LRRC75A	Q8NAA5	344 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	SYT14	Q8NB59	555 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	MAPK1IP1L	Q8NDC0	245 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	OR13C2	Q8NGS9	318 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	NANOS1	Q8WY41	292 aa	Known RBP	10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	HDAC2	Q92769	488 aa	Known RBP	10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	MCHR2	Q969V1	340 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	C7orf34	Q96L11	122 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	SH3GL3	Q99963	347 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	REG4	Q9BYZ8	158 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	ANKRD19P	Q9H560	264 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	ZNF442	Q9H7R0	627 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	NMNAT1	Q9HAN9	279 aa	Predicted RBP	10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	CD300A	Q9UGN4	299 aa		10.18	□□□□□ -0.78
PSMC3-205	ENST00000528362	DNHD1	Q96M86	4753 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	IGHV4-30-2	A0A087WSY4	118 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	IGKV1D-43	A0A0B4J1Z2	117 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362		A0A1W2PRQ8	180 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	EFCAB9	A8MZ26	197 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	DYNC1I1	O14576	645 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	CDC42EP2	O14613	210 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	UBL3	O95164	117 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	SLC2A10	O95528	541 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	RAB36	O95755	333 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	IGHM	P01871	453 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	SAG	P10523	405 aa	Predicted RBP	10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	ZNF26	P17031	533 aa	Predicted RBP	10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	THBS4	P35443	961 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	GPR4	P46093	362 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	SNRPD2	P62316	118 aa	Known RBP	10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	RAB1A	P62820	205 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	VLDLR	P98155	873 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	FMOD	Q06828	376 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	KRTAP1-1	Q07627	177 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	DGCR6	Q14129	220 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	RAB39A	Q14964	217 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	RAB35	Q15286	201 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	EFNB3	Q15768	340 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	IQCC	Q4KMZ1	466 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	SAMD4B	Q5PRF9	694 aa	Known RBP	10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	C10orf128	Q5T292	105 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	OAF	Q86UD1	273 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	ZNF584	Q8IVC4	421 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	RNF113B	Q8IZP6	322 aa	Known RBP	10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	IL17RD	Q8NFM7	739 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	OR10H5	Q8NGA6	315 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	OR4K5	Q8NGD3	323 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	OR51A7	Q8NH64	312 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	ZNF519	Q8TB69	540 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	SLC7A13	Q8TCU3	470 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	CCT8L2	Q96SF2	557 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	KCNK17	Q96T54	332 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	CDRT15	Q96T59	188 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	TXNIP	Q9H3M7	391 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	PLK3	Q9H4B4	646 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	DENND2D	Q9H6A0	471 aa	Predicted RBP	10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	GORASP2	Q9H8Y8	452 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	MAGEL2	Q9UJ55	1249 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	SAMD4A	Q9UPU9	718 aa	Known RBP	10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	PMF1-BGLAP	U3KQ54	211 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362		V9GYQ6	96 aa		10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	NSD1	Q96L73	2696 aa	Predicted RBP	10.17	□□□□□ -0.78
PSMC3-205	ENST00000528362	FN1	P02751	2386 aa	Known RBP	10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362		A0A096LNT2	108 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362		B9A039	149 aa		10.16	□□□□□ -0.78
PSMC3-205	ENST00000528362	hCG_2039718	K7EN88	272 aa		10.16	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms