RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 WDR88Q6ZMY6 472 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 RBM45Q8IUH3 476 aaKnown RBP9.07□□□□□ -0.96
CPSF1-203ENST00000527916 PCYOX1LQ8NBM8 494 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 OR6X1Q8NH79 312 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 UBASH3BQ8TF42 649 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 MRPL24Q96A35 216 aaKnown RBP9.07□□□□□ -0.96
CPSF1-203ENST00000527916 ZNF75AQ96N20 296 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 ZNF583Q96ND8 569 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 EMC6Q9BV81 110 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 SUCNR1Q9BXA5 334 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 NANSQ9NR45 359 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 FGFR1OP2Q9NVK5 253 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 GID8Q9NWU2 228 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 MED29Q9NX70 200 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 TAS2R5Q9NYW4 299 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 ZNF229Q9UJW7 825 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 BAG5Q9UL15 447 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 SLC7A7Q9UM01 511 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 SPEF1Q9Y4P9 236 aa9.07□□□□□ -0.96
CPSF1-203ENST00000527916 HTR3EA5X5Y0 456 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 MRASO14807 208 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 ENTPD5O75356 428 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 HIST1H2ABP04908 130 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 MSMBP08118 114 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 ASAH2BP0C7U1 165 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 THRBP10828 461 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 CALCRP30988 508 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 RBM34P42696 430 aaKnown RBP9.06□□□□□ -0.96
CPSF1-203ENST00000527916 TUBA1BP68363 451 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 TUBA4AP68366 448 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 HGFACQ04756 655 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 CAMK2DQ13557 499 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 RIN1Q13671 783 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 TRIP10Q15642 601 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 REP15Q6BDI9 236 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 CGB2Q6NT52 195 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 VHLLQ6RSH7 139 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 THSD4Q6ZMP0 1018 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 TUBA1AQ71U36 451 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 HIST3H2AQ7L7L0 130 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 PIWIL3Q7Z3Z3 882 aaKnown RBP9.06□□□□□ -0.96
CPSF1-203ENST00000527916 TSPYL5Q86VY4 417 aaPredicted RBP9.06□□□□□ -0.96
CPSF1-203ENST00000527916 OR6N1Q8NGY5 312 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 VANGL1Q8TAA9 524 aaPredicted RBP9.06□□□□□ -0.96
CPSF1-203ENST00000527916 C10orf82Q8WW14 230 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 LIPHQ8WWY8 451 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 HIST1H2ACQ93077 130 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 TMEM54Q969K7 222 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 DOK1Q99704 481 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 FOXB1Q99853 325 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 PRSS27Q9BQR3 290 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 ULBP2Q9BZM5 246 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 DYNLRB1Q9NP97 96 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 GLTPQ9NZD2 209 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 POFUT2Q9Y2G5 429 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 AP3M1Q9Y2T2 418 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 ZNF281Q9Y2X9 895 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 SH3GLB1Q9Y371 365 aa9.06□□□□□ -0.96
CPSF1-203ENST00000527916 IGHV2OR16-5A0A0B4J2B6 119 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 LOC100653049A0A140TA62 436 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 ZNF503-AS2A6NEH8 195 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 CENPBD1B2RD01 187 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 C11orf98E9PRG8 122 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 hCG_2039718K7EN88 272 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 MGRN1O60291 552 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 KRT34O76011 436 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 OR5F1O95221 314 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 CH25HO95992 272 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 BCL10O95999 233 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 MT-ND1P03886 318 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 TSPAN19P0C672 248 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 ZNF14P17017 642 aaPredicted RBP9.05□□□□□ -0.96
CPSF1-203ENST00000527916 KDELR2P33947 212 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 CSNK1A1P48729 337 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 EVX1P49640 407 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 BIDP55957 195 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 GSG1Q2KHT4 349 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 NRN1LQ496H8 165 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 CARD17Q5XLA6 110 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 FAHD2BQ6P2I3 314 aaPredicted RBP9.05□□□□□ -0.96
CPSF1-203ENST00000527916 ZNF813Q6ZN06 617 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 SLC35D2Q76EJ3 337 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 MDP1Q86V88 176 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 CARM1Q86X55 608 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 WDFY1Q8IWB7 410 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 OR51F2Q8NH61 342 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 RP9Q8TA86 221 aaKnown RBP9.05□□□□□ -0.96
CPSF1-203ENST00000527916 FAHD2AQ96GK7 314 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 SLC25A44Q96H78 314 aaPredicted RBP9.05□□□□□ -0.96
CPSF1-203ENST00000527916 LRRC37BQ96QE4 947 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 SEC61A2Q9H9S3 476 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 MEPEQ9NQ76 525 aaPredicted RBP9.05□□□□□ -0.96
CPSF1-203ENST00000527916 ZNF446Q9NWS9 450 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 RIMS3Q9UJD0 308 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 FBXL3Q9UKT7 428 aa9.05□□□□□ -0.96
CPSF1-203ENST00000527916 CMYA5Q8N3K9 4069 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 TRAV20A0A0B4J274 112 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 TMEM129A0AVI4 362 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 FAM220BPB1ANY3 271 aa9.04□□□□□ -0.96
CPSF1-203ENST00000527916 RNF13O43567 381 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms