RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 GIFP27352 417 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 CFPP27918 469 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 MAGEB1P43366 347 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 DLX5P56178 289 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 AP3S2P59780 193 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 MFSD13AQ14CX5 517 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 COL28A1Q2UY09 1125 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 BTN2A1Q7KYR7 527 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 ANKRD37Q7Z713 158 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 APCDD1LQ8NCL9 501 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 NFAM1Q8NET5 270 aaPredicted RBP13.85□□□□□ -0.19
USH1C-207ENST00000527720 MIB2Q96AX9 1013 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 HAVCR1Q96D42 359 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 C4orf45Q96LM5 186 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 OR5V1Q9UGF6 321 aa13.85□□□□□ -0.19
USH1C-207ENST00000527720 IGLV1-36A0A0B4J1U3 117 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 CCDC85CA6NKD9 419 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 ZNF593O00488 134 aaPredicted RBP13.84□□□□□ -0.19
USH1C-207ENST00000527720 GPR171O14626 319 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 STOMP27105 288 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 DMWDQ09019 674 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 C17orf67Q0P5P2 114 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 CD276Q5ZPR3 534 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 SLC18B1Q6NT16 456 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 LINGO2Q7L985 606 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 ZNF679Q8IYX0 411 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 DND1Q8IYX4 353 aaKnown RBP13.84□□□□□ -0.19
USH1C-207ENST00000527720 PLSCR3Q9NRY6 295 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 SLCO1C1Q9NYB5 712 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 KLHL9Q9P2J3 617 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 KCNG2Q9UJ96 466 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 TRAV6A0A075B6T7 132 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 FTCDNL1E5RQL4 147 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 HLA-DQA2P01906 255 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 HEXBP07686 556 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 ADRB1P08588 477 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 NAGAP17050 411 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 ADRA2CP18825 462 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 CRABP1P29762 137 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 ART1P52961 327 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 INSM1Q01101 510 aaPredicted RBP13.84□□□□□ -0.19
USH1C-207ENST00000527720 ROM1Q03395 351 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 ZP4Q12836 540 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 SLC17A1Q14916 467 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 TEX30Q5JUR7 227 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 KCTD18Q6PI47 426 aaPredicted RBP13.84□□□□□ -0.19
USH1C-207ENST00000527720 ZNF574Q6ZN55 896 aaPredicted RBP13.84□□□□□ -0.19
USH1C-207ENST00000527720 PRSS45Q7RTY3 260 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 PRSS35Q8N3Z0 413 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 GRPEL2Q8TAA5 225 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 CEP76Q8TAP6 659 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 SYNPRQ8TBG9 265 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 HYLS1Q96M11 299 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 STMN3Q9NZ72 180 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 EMC3Q9P0I2 261 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 FOXJ3Q9UPW0 622 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 BOLA1Q9Y3E2 137 aa13.84□□□□□ -0.19
USH1C-207ENST00000527720 TNRC6BQ9UPQ9 1833 aaKnown RBP13.84□□□□□ -0.19
USH1C-207ENST00000527720 PI4KAP42356 2102 aa13.83□□□□□ -0.19
USH1C-207ENST00000527720 SLC22A23A1A5C7 686 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 ANXA2P2A6NMY6 339 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 SLC16A7O60669 478 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 KRT33AO76009 404 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 PLGP00747 810 aaPredicted RBP13.83□□□□□ -0.2
USH1C-207ENST00000527720 ANXA2P07355 339 aaKnown RBP13.83□□□□□ -0.2
USH1C-207ENST00000527720 APOBEC1P41238 236 aaKnown RBP13.83□□□□□ -0.2
USH1C-207ENST00000527720 SOX2P48431 317 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 NKAIN1Q4KMZ8 207 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 RNASE12Q5GAN4 147 aaKnown RBP13.83□□□□□ -0.2
USH1C-207ENST00000527720 ZNF454Q8N9F8 522 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 ZNF248Q8NDW4 579 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 OR56B4Q8NH76 319 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 RNF128Q8TEB7 428 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 FCAMRQ8WWV6 532 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 MCHR2Q969V1 340 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 TMEM106AQ96A25 262 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 AUNIPQ9H7T9 357 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 TMEM165Q9HC07 324 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 EMC7Q9NPA0 242 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 ALPK2Q86TB3 2170 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 A0A087WV48 116 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 A6NIZ1 184 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 NPIPB13A6NJU9 1138 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 NPIPB4C9JG80 1138 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 ALOX12BO75342 701 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 WISP1O95388 367 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 ONECUT2O95948 504 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 H2AFB2P0C5Z0 115 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 EPHA8P29322 1005 aaPredicted RBP13.83□□□□□ -0.2
USH1C-207ENST00000527720 KIR3DL2P43630 455 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 RAP1BP61224 184 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 RAP1AP62834 184 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 NR0B2Q15466 257 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 MEP1BQ16820 701 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 SHISA6Q6ZSJ9 500 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 ZNF227Q86WZ6 799 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 IZUMO1Q8IYV9 350 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 OR8K3Q8NH51 312 aa13.83□□□□□ -0.2
USH1C-207ENST00000527720 ZNF587Q96SQ5 575 aaPredicted RBP13.83□□□□□ -0.2
USH1C-207ENST00000527720 OR51J1Q9H342 316 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms