RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 NAA20P61599 178 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 HPCAP84074 193 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 TBC1D28Q2M2D7 210 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 COX20Q5RI15 118 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 ATG16L1Q676U5 607 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 DHRS7BQ6IAN0 325 aaPredicted RBP11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 LCA5Q86VQ0 697 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 SNX32Q86XE0 403 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 LDLRAD3Q86YD5 345 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 RIMKLAQ8IXN7 391 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 FITM2Q8N6M3 262 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 ZNF417Q8TAU3 575 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 CFHR4Q92496 578 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 ZNF587Q96SQ5 575 aaPredicted RBP11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 NUDT16L1Q9BRJ7 211 aaKnown RBP11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 C1orf198Q9H425 327 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 CYSLTR2Q9NS75 346 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 RLIMQ9NVW2 624 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 GIMAP2Q9UG22 337 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 ZDHHC8Q9ULC8 765 aa11.54□□□□□ -0.56
NKX3-1-202ENST00000523261 SACSQ9NZJ4 4579 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 POC1B-GALNT4F8VUJ3 575 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 LYPLA1O75608 230 aaPredicted RBP11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 HPRP00739 348 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 IL7RP16871 459 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 UQCRC2P22695 453 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 CPT2P23786 658 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 PCBP3P57721 371 aaKnown RBP11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 GNB2P62879 340 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 TNFAIP6P98066 277 aaPredicted RBP11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 CD69Q07108 199 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 DOC2BQ14184 412 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 ZNF718Q3SXZ3 478 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 TTMPQ5BVD1 217 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 SPATA46Q5T0L3 261 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 THEM4Q5T1C6 240 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 NHLRC1Q6VVB1 395 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 ZCCHC23Q6ZST2 131 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 MUC20Q8N307 709 aaPredicted RBP11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 SLC22A24Q8N4F4 322 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 C11orf44Q8N8P7 122 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 ANKFN1Q8N957 763 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 OR6N1Q8NGY5 312 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 CCDC126Q96EE4 140 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 NAPGQ99747 312 aaPredicted RBP11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 ARHGDIGQ99819 225 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 OCSTAMPQ9BR26 566 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 ACOXLQ9NUZ1 547 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 UTP11Q9Y3A2 253 aaKnown RBP11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 FIS1Q9Y3D6 152 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 STAB2Q8WWQ8 2551 aa11.53□□□□□ -0.56
NKX3-1-202ENST00000523261 CENPVL3A0A0U1RRI6 287 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 MS4A18H0YCH9 400 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 AZIN1O14977 448 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 MGRN1O60291 552 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 SFTPBP07988 381 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 RPS2P15880 293 aaKnown RBP11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 MAPK1P28482 360 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 GRPRP30550 384 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 ARRB2P32121 409 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 CRHR1P34998 444 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 LIPAP38571 399 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 COPZ1P61923 177 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 GNA13Q14344 377 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 SYPL1Q16563 259 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 MS4A18Q3C1V0 323 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 DEFB121Q5J5C9 76 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 ZYG11AQ6WRX3 759 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 TIFABQ6ZNK6 161 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 H1FNTQ75WM6 255 aaPredicted RBP11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 KLBQ86Z14 1044 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 UEVLDQ8IX04 471 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 OR1J2Q8NGS2 313 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 TXNDC15Q96J42 360 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 TRNT1Q96Q11 434 aaKnown RBP11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 SH3GL3Q99963 347 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 DPY30Q9C005 99 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 TMEM165Q9HC07 324 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 MSL2Q9HCI7 577 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 CGGBP1Q9UFW8 167 aaPredicted RBP11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 DNAJC15Q9Y5T4 150 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 SAR1BQ9Y6B6 198 aa11.52□□□□□ -0.57
NKX3-1-202ENST00000523261 CDHR4A6H8M9 788 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 C3orf84H3BNL1 204 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 HMGN4O00479 90 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 PTHP01270 115 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 DBIP07108 87 aaKnown RBP11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 MYL2P10916 166 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 PRG2P13727 222 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 PRPS1L1P21108 318 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 NRN1LQ496H8 165 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 CFAP157Q5JU67 520 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 MBNL2Q5VZF2 373 aaKnown RBP11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 TMEM53Q6P2H8 277 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 ZNF101Q8IZC7 436 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 MIER2Q8N344 545 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 GALNT4Q8N4A0 578 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 ADPRHL1Q8NDY3 354 aa11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 KLF14Q8TD94 323 aaPredicted RBP11.51□□□□□ -0.57
NKX3-1-202ENST00000523261 GATAD2BQ8WXI9 593 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms