RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 TNNI1P19237 187 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 HTR1EP28566 365 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 ATP5C1P36542 298 aaKnown RBP3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 RFX3P48380 749 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 STX17P56962 302 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 LYZP61626 148 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 ZNF92Q03936 586 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 PDIA2Q13087 525 aaKnown RBP3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 FZD2Q14332 565 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 TGFBIQ15582 683 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 ZNF79Q15937 498 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 ZNF630Q2M218 657 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 TMEM255AQ5JRV8 349 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 CLEC2AQ6UVW9 174 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 ZNF571Q7Z3V5 609 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 PRR22Q8IZ63 422 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 TMEM61Q8N0U2 210 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 IQCKQ8N0W5 287 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 ZNF740Q8NDX6 193 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 UCN3Q969E3 161 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 MYDGFQ969H8 173 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 HSFY1Q96LI6 401 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 C11orf70Q9BRQ4 267 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 NXF3Q9H4D5 531 aaKnown RBP3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 MTRF1LQ9UGC7 380 aaKnown RBP3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 TP53TG5Q9Y2B4 290 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 TTC41PQ6P2S7 1318 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 WDR7Q9Y4E6 1490 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 PIKFYVEQ9Y2I7 2098 aa3.15□□□□□ -1.91
HMGB1P1-201ENST00000522557 CNTNAP1P78357 1384 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 YEATS2Q9ULM3 1422 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 TRAV25A0A0B4J276 109 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 A0A1B0GVI7 797 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 EIF3HO15372 352 aaKnown RBP eCLIP3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 MGRN1O60291 552 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 EIF3GO75821 320 aaKnown RBP eCLIP3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 BBOX1O75936 387 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 HPNP05981 417 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 ZBTB25P24278 435 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 NAA10P41227 235 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 SYKP43405 635 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 NAMPTP43490 491 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 SUB1P53999 127 aaKnown RBP eCLIP3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 SELENBP1Q13228 472 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 ILKQ13418 452 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 NSDHLQ15738 373 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 NRF1Q16656 503 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 FHL5Q5TD97 284 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 MMAAQ8IVH4 418 aaKnown RBP3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 HSD17B11Q8NBQ5 300 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 ANKRD49Q8WVL7 239 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 ATP5SQ99766 215 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 BPIFA3Q9BQP9 254 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 POLR2J2Q9GZM3 115 aaKnown RBP3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 POLR2J3Q9H1A7 115 aaKnown RBP3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 GCNT4Q9P109 453 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 PITPNC1Q9UKF7 332 aa3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 COL22A1Q8NFW1 1626 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P1-201ENST00000522557 USP47Q96K76 1375 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 SPECC1L-ADORA2AF8WAN1 911 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 H0YHG0 523 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 C6orf47O95873 294 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 IGLV1-47P01700 117 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 CCNB1P14635 433 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 GABRR1P24046 479 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 CCNE1P24864 410 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 STOMP27105 288 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 FMO3P31513 532 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 RPS5P46782 204 aaKnown RBP3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 CSNK1EP49674 416 aaKnown RBP3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 TMED10P49755 219 aaKnown RBP3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 CAV2P51636 162 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 C21orf59P57076 290 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 PSG7Q13046 419 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 ITIH4Q14624 930 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 SGCAQ16586 387 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 SPECC1LQ69YQ0 1117 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 PDIK1LQ8N165 341 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 OR10G9Q8NGN4 311 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 OR10R2Q8NGX6 335 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 AGR3Q8TD06 166 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 DCUN1D4Q92564 292 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 MAGEB18Q96M61 343 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 RARRES2Q99969 163 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 C20orf24Q9BUV8 137 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 NTN4Q9HB63 628 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 MRPL47Q9HD33 250 aaKnown RBP3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 ABCB10Q9NRK6 738 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 MTCH1Q9NZJ7 389 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 CELA1Q9UNI1 258 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 TRAF3IP3Q9Y228 551 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 SLC25A15Q9Y619 301 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 F11RQ9Y624 299 aaKnown RBP3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 GOLGA3Q08378 1498 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 RAPGEF2Q9Y4G8 1499 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 ARAP3Q8WWN8 1544 aa3.13□□□□□ -1.91
HMGB1P1-201ENST00000522557 DENND4BO75064 1496 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P1-201ENST00000522557 SIRPB1O00241 398 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms