RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 CDK20Q8IZL9 346 aa21.83■■□□□ 1.09
VEGFA-220ENST00000519767 PCYOX1LQ8NBM8 494 aa21.83■■□□□ 1.09
VEGFA-220ENST00000519767 ZNF583Q96ND8 569 aa21.83■■□□□ 1.09
VEGFA-220ENST00000519767 MEPEQ9NQ76 525 aaPredicted RBP21.83■■□□□ 1.09
VEGFA-220ENST00000519767 TMEM38BQ9NVV0 291 aa21.83■■□□□ 1.09
VEGFA-220ENST00000519767 REV1Q9UBZ9 1251 aa21.83■■□□□ 1.09
VEGFA-220ENST00000519767 A0A1W2PRG6 482 aa21.82■■□□□ 1.08
VEGFA-220ENST00000519767 CENPBD1B2RD01 187 aa21.82■■□□□ 1.08
VEGFA-220ENST00000519767 MRASO14807 208 aa21.82■■□□□ 1.08
VEGFA-220ENST00000519767 SASH3O75995 380 aa21.82■■□□□ 1.08
VEGFA-220ENST00000519767 QDPRP09417 244 aa21.82■■□□□ 1.08
VEGFA-220ENST00000519767 PGA4P0DJD7 388 aa21.82■■□□□ 1.08
VEGFA-220ENST00000519767 PGA3P0DJD8 388 aa21.82■■□□□ 1.08
VEGFA-220ENST00000519767 THRBP10828 461 aa21.82■■□□□ 1.08
VEGFA-220ENST00000519767 FUT1P19526 365 aa21.82■■□□□ 1.08
VEGFA-220ENST00000519767 RAB39AQ14964 217 aa21.82■■□□□ 1.08
VEGFA-220ENST00000519767 FXNQ16595 210 aa21.82■■□□□ 1.08
VEGFA-220ENST00000519767 C10orf82Q8WW14 230 aa21.82■■□□□ 1.08
VEGFA-220ENST00000519767 HPS1Q92902 700 aa21.82■■□□□ 1.08
VEGFA-220ENST00000519767 MRPL37Q9BZE1 423 aaKnown RBP21.82■■□□□ 1.08
VEGFA-220ENST00000519767 SAR1AQ9NR31 198 aa21.82■■□□□ 1.08
VEGFA-220ENST00000519767 RIMS3Q9UJD0 308 aa21.82■■□□□ 1.08
VEGFA-220ENST00000519767 SLC22A23A1A5C7 686 aa21.81■■□□□ 1.08
VEGFA-220ENST00000519767 HTR3EA5X5Y0 456 aa21.81■■□□□ 1.08
VEGFA-220ENST00000519767 M0R233 179 aa21.81■■□□□ 1.08
VEGFA-220ENST00000519767 FXYD1O00168 92 aa21.81■■□□□ 1.08
VEGFA-220ENST00000519767 CHN2P52757 468 aa21.81■■□□□ 1.08
VEGFA-220ENST00000519767 CLRN1P58418 232 aa21.81■■□□□ 1.08
VEGFA-220ENST00000519767 HIST3H3Q16695 136 aa21.81■■□□□ 1.08
VEGFA-220ENST00000519767 TMEM53Q6P2H8 277 aa21.81■■□□□ 1.08
VEGFA-220ENST00000519767 UGT2A3Q6UWM9 527 aa21.81■■□□□ 1.08
VEGFA-220ENST00000519767 LIPHQ8WWY8 451 aa21.81■■□□□ 1.08
VEGFA-220ENST00000519767 C1orf198Q9H425 327 aa21.81■■□□□ 1.08
VEGFA-220ENST00000519767 STX18Q9P2W9 335 aaKnown RBP21.81■■□□□ 1.08
VEGFA-220ENST00000519767 SLC7A8Q9UHI5 535 aa21.81■■□□□ 1.08
VEGFA-220ENST00000519767 LOC100653049A0A140TA62 436 aa21.8■■□□□ 1.08
VEGFA-220ENST00000519767 KRT34O76011 436 aa21.8■■□□□ 1.08
VEGFA-220ENST00000519767 TGFAP01135 160 aa21.8■■□□□ 1.08
VEGFA-220ENST00000519767 PTHP01270 115 aa21.8■■□□□ 1.08
VEGFA-220ENST00000519767 IGFBP1P08833 259 aaPredicted RBP21.8■■□□□ 1.08
VEGFA-220ENST00000519767 TACSTD2P09758 323 aa21.8■■□□□ 1.08
VEGFA-220ENST00000519767 HNF1AP20823 631 aa21.8■■□□□ 1.08
VEGFA-220ENST00000519767 ZNF84P51523 738 aa21.8■■□□□ 1.08
VEGFA-220ENST00000519767 MELKQ14680 651 aa21.8■■□□□ 1.08
VEGFA-220ENST00000519767 SLC36A2Q495M3 483 aa21.8■■□□□ 1.08
VEGFA-220ENST00000519767 REP15Q6BDI9 236 aa21.8■■□□□ 1.08
VEGFA-220ENST00000519767 DEF8Q6ZN54 512 aa21.8■■□□□ 1.08
VEGFA-220ENST00000519767 TMEM239Q8WW34 195 aa21.8■■□□□ 1.08
VEGFA-220ENST00000519767 SGTBQ96EQ0 304 aa21.8■■□□□ 1.08
VEGFA-220ENST00000519767 MRPL13Q9BYD1 178 aaKnown RBP21.8■■□□□ 1.08
VEGFA-220ENST00000519767 FGFR1OP2Q9NVK5 253 aa21.8■■□□□ 1.08
VEGFA-220ENST00000519767 OR7A10O76100 309 aa21.79■■□□□ 1.08
VEGFA-220ENST00000519767 PATE4P0C8F1 98 aa21.79■■□□□ 1.08
VEGFA-220ENST00000519767 DAP3P51398 398 aaKnown RBP21.79■■□□□ 1.08
VEGFA-220ENST00000519767 UGT2B15P54855 530 aa21.79■■□□□ 1.08
VEGFA-220ENST00000519767 RPL18Q07020 188 aaKnown RBP21.79■■□□□ 1.08
VEGFA-220ENST00000519767 RIN1Q13671 783 aa21.79■■□□□ 1.08
VEGFA-220ENST00000519767 NKAIN4Q8IVV8 208 aa21.79■■□□□ 1.08
VEGFA-220ENST00000519767 FGFBP3Q8TAT2 258 aa21.79■■□□□ 1.08
VEGFA-220ENST00000519767 TMEM255BQ8WV15 326 aa21.79■■□□□ 1.08
VEGFA-220ENST00000519767 MCHR2Q969V1 340 aa21.79■■□□□ 1.08
VEGFA-220ENST00000519767 SEPHS2Q99611 448 aa21.79■■□□□ 1.08
VEGFA-220ENST00000519767 SH3GL3Q99963 347 aa21.79■■□□□ 1.08
VEGFA-220ENST00000519767 RNF121Q9H920 327 aa21.79■■□□□ 1.08
VEGFA-220ENST00000519767 INIPQ9NRY2 104 aa21.79■■□□□ 1.08
VEGFA-220ENST00000519767 AP3M1Q9Y2T2 418 aa21.79■■□□□ 1.08
VEGFA-220ENST00000519767 MED31Q9Y3C7 131 aa21.79■■□□□ 1.08
VEGFA-220ENST00000519767 MCIDASD6RGH6 385 aa21.78■■□□□ 1.08
VEGFA-220ENST00000519767 IGFBP5P24593 272 aa21.78■■□□□ 1.08
VEGFA-220ENST00000519767 IFNA8P32881 189 aa21.78■■□□□ 1.08
VEGFA-220ENST00000519767 KDELR2P33947 212 aa21.78■■□□□ 1.08
VEGFA-220ENST00000519767 SELENOVP59797 346 aa21.78■■□□□ 1.08
VEGFA-220ENST00000519767 PIN1Q13526 163 aaPredicted RBP21.78■■□□□ 1.08
VEGFA-220ENST00000519767 MSMPQ1L6U9 139 aa21.78■■□□□ 1.08
VEGFA-220ENST00000519767 CYBRD1Q53TN4 286 aa21.78■■□□□ 1.08
VEGFA-220ENST00000519767 FAM120AOSQ5T036 256 aa21.78■■□□□ 1.08
VEGFA-220ENST00000519767 ZNF584Q8IVC4 421 aa21.78■■□□□ 1.08
VEGFA-220ENST00000519767 ARIH2OSQ8N7S6 290 aa21.78■■□□□ 1.08
VEGFA-220ENST00000519767 SLC30A7Q8NEW0 376 aa21.78■■□□□ 1.08
VEGFA-220ENST00000519767 OR4K5Q8NGD3 323 aa21.78■■□□□ 1.08
VEGFA-220ENST00000519767 OR1J2Q8NGS2 313 aa21.78■■□□□ 1.08
VEGFA-220ENST00000519767 LRMDAQ9H2I8 198 aa21.78■■□□□ 1.08
VEGFA-220ENST00000519767 GPR160Q9UJ42 338 aa21.78■■□□□ 1.08
VEGFA-220ENST00000519767 ZNF346Q9UL40 294 aaKnown RBP21.78■■□□□ 1.08
VEGFA-220ENST00000519767 MALRD1Q5VYJ5 2156 aa21.78■■□□□ 1.08
VEGFA-220ENST00000519767 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.78■■□□□ 1.082e-8■■■□□ 14.7
VEGFA-220ENST00000519767 SLC22A2O15244 555 aa21.77■■□□□ 1.08
VEGFA-220ENST00000519767 PHF1O43189 567 aaPredicted RBP21.77■■□□□ 1.08
VEGFA-220ENST00000519767 LILRA1O75019 489 aa21.77■■□□□ 1.08
VEGFA-220ENST00000519767 F13BP05160 661 aa21.77■■□□□ 1.08
VEGFA-220ENST00000519767 TSPAN19P0C672 248 aa21.77■■□□□ 1.08
VEGFA-220ENST00000519767 ACADSP16219 412 aa21.77■■□□□ 1.08
VEGFA-220ENST00000519767 SRD5A1P18405 259 aa21.77■■□□□ 1.08
VEGFA-220ENST00000519767 PLP2Q04941 152 aa21.77■■□□□ 1.08
VEGFA-220ENST00000519767 SLC16A14Q7RTX9 510 aa21.77■■□□□ 1.08
VEGFA-220ENST00000519767 SYT3Q9BQG1 590 aa21.77■■□□□ 1.08
VEGFA-220ENST00000519767 TPK1Q9H3S4 243 aa21.77■■□□□ 1.08
VEGFA-220ENST00000519767 CHODLQ9H9P2 273 aa21.77■■□□□ 1.08
VEGFA-220ENST00000519767 DUSP13Q9UII6 198 aa21.77■■□□□ 1.08
VEGFA-220ENST00000519767 NPIPB13A6NJU9 1138 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms