RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 FKBP7Q9Y680 259 aa8.38□□□□□ -1.07
CLN8-203ENST00000518780 HSPE1-MOB4S4R3N1 261 aa8.38□□□□□ -1.07
CLN8-203ENST00000518780 WIPF3A6NGB9 483 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 SNTNA6NMZ2 147 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 ZNF587BE7ETH6 402 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 TPD52L2O43399 206 aaKnown RBP8.37□□□□□ -1.07
CLN8-203ENST00000518780 IGFBP1P08833 259 aaPredicted RBP8.37□□□□□ -1.07
CLN8-203ENST00000518780 PLA2G2AP14555 144 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 NPR2P20594 1047 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 BMP5P22003 454 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 POLR2IP36954 125 aaKnown RBP8.37□□□□□ -1.07
CLN8-203ENST00000518780 CAPGP40121 348 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 CDKN2AP42771 156 aaKnown RBP8.37□□□□□ -1.07
CLN8-203ENST00000518780 ASCL1P50553 236 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 ZNF84P51523 738 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 SNRPGP62308 76 aaKnown RBP8.37□□□□□ -1.07
CLN8-203ENST00000518780 ADORA2A-AS1P86434 159 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.37□□□□□ -1.07
CLN8-203ENST00000518780 LGALS3BPQ08380 585 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 CD47Q08722 323 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 GTF3C1Q12789 2109 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 MELKQ14680 651 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 SNAPC1Q16533 368 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 ZIK1Q3SY52 487 aaPredicted RBP8.37□□□□□ -1.07
CLN8-203ENST00000518780 MESTQ5EB52 335 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 SLC35F1Q5T1Q4 408 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 C10orf128Q5T292 105 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 TSPO2Q5TGU0 170 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 MEDAGQ5VYS4 303 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 OR7E24Q6IFN5 339 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 VWA1Q6PCB0 445 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 ZNF627Q7L945 461 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 DPPA2Q7Z7J5 298 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 CCDC36Q8IYA8 594 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 UBE2J2Q8N2K1 259 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 FAM26EQ8N5C1 309 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 NPEPL1Q8NDH3 523 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 C1orf162Q8NEQ5 155 aaPredicted RBP8.37□□□□□ -1.07
CLN8-203ENST00000518780 OR2T4Q8NH00 348 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 OR4K13Q8NH42 304 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 CA5BP1Q8WTZ4 195 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 TFAP2CQ92754 450 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 HDAC2Q92769 488 aaKnown RBP8.37□□□□□ -1.07
CLN8-203ENST00000518780 MCHR2Q969V1 340 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 NMD3Q96D46 503 aaKnown RBP8.37□□□□□ -1.07
CLN8-203ENST00000518780 Q96MT0 163 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 MBOAT4Q96T53 435 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 NMNAT3Q96T66 252 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 ADI1Q9BV57 179 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 ULBP2Q9BZM5 246 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 OCEL1Q9H607 264 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 MOV10Q9HCE1 1003 aaKnown RBP8.37□□□□□ -1.07
CLN8-203ENST00000518780 KCNJ16Q9NPI9 418 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 SLC7A10Q9NS82 523 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 IMPAD1Q9NX62 359 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 TAS2R16Q9NYV7 291 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 TVP23BQ9NYZ1 205 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 GPR52Q9Y2T5 361 aa8.37□□□□□ -1.07
CLN8-203ENST00000518780 SMG1Q96Q15 3661 aaKnown RBP8.36□□□□□ -1.07
CLN8-203ENST00000518780 PRR23D1E9PI22 279 aaPredicted RBP8.36□□□□□ -1.07
CLN8-203ENST00000518780 PRODHO43272 600 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 DHHO43323 396 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 KHDRBS3O75525 346 aaKnown RBP8.36□□□□□ -1.07
CLN8-203ENST00000518780 UPK3AO75631 287 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 SMNDC1O75940 238 aaKnown RBP eCLIP8.36□□□□□ -1.07
CLN8-203ENST00000518780 CLDN14O95500 239 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 QDPRP09417 244 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 PRR23D2P0DMB1 279 aaPredicted RBP8.36□□□□□ -1.07
CLN8-203ENST00000518780 PSMB1P20618 241 aaKnown RBP8.36□□□□□ -1.07
CLN8-203ENST00000518780 COX5AP20674 150 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 EPHA2P29317 976 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 ADARB1P78563 741 aaKnown RBP8.36□□□□□ -1.07
CLN8-203ENST00000518780 ROR2Q01974 943 aaKnown RBP8.36□□□□□ -1.07
CLN8-203ENST00000518780 TEKQ02763 1124 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 GLO1Q04760 184 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 RUNX1T1Q06455 604 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 TMED1Q13445 227 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 SLC35D3Q5M8T2 416 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 TMEM236Q5W0B7 351 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 LEG1Q6P5S2 330 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 LRFN4Q6PJG9 635 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 SLC25A47Q6Q0C1 308 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 IZUMO2Q6UXV1 221 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 ZBTB46Q86UZ6 589 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 P2RY8Q86VZ1 359 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 CCDC71Q8IV32 467 aaPredicted RBP8.36□□□□□ -1.07
CLN8-203ENST00000518780 LIX1LQ8IVB5 337 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 GABRG1Q8N1C3 465 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 C17orf78Q8N4C9 275 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 IQCF1Q8N6M8 205 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 ZNF610Q8N9Z0 462 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 SYT14Q8NB59 555 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 SLC37A3Q8NCC5 494 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 TMEM163Q8TC26 289 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 RFKQ969G6 155 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 RASD2Q96D21 266 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 ZNF184Q99676 751 aaPredicted RBP8.36□□□□□ -1.07
CLN8-203ENST00000518780 NMNAT2Q9BZQ4 307 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 RACGAP1Q9H0H5 632 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 SYT4Q9H2B2 425 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms