RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 IGHV4-59P01825 116 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 EDN1P05305 212 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 WNT2P09544 360 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 SLC35E2P0CK97 266 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 IGHV4-38-2P0DP08 117 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 CSNK2A2P19784 350 aaPredicted RBP3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 ZP3P21754 424 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 CXCR2P25025 360 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 MSNP26038 577 aaKnown RBP3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 CERS1P27544 350 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 CBX5P45973 191 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 YAP1P46937 504 aaKnown RBP3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 HCAR3P49019 387 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 PTH2RP49190 550 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 GLUD2P49448 558 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 GNG10P50151 68 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 SSR4P51571 173 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 DLX5P56178 289 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 PAFAH1B2P68402 229 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 MGAT3Q09327 533 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 TRAF2Q12933 501 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 FLOT2Q14254 428 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 TMEM249Q2WGJ8 235 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 PGGHGQ32M88 737 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 Q4G0T1 1027 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 ACER2Q5QJU3 275 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 C10orf25Q5T742 122 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 OR2G6Q5TZ20 316 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 REP15Q6BDI9 236 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 PVRIGQ6DKI7 326 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 CD300LGQ6UXG3 332 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 GDPD4Q6W3E5 623 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 C12orf54Q6X4T0 127 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 USP50Q70EL3 339 aaPredicted RBP3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 BHLHA9Q7RTU4 235 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 C16orf82Q7Z2V1 217 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 TMEM25Q86YD3 366 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 HIPK1Q86Z02 1210 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 CCDC71Q8IV32 467 aaPredicted RBP3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 PRR22Q8IZ63 422 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 ZFP82Q8N141 532 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 SAMD12Q8N8I0 201 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 DUSP18Q8NEJ0 188 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 OR4K2Q8NGD2 314 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 OR5T2Q8NGG2 359 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 RNF133Q8WVZ7 376 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 EEF1AKMT3Q96AZ1 226 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 ZNF486Q96H40 463 aaPredicted RBP3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 SEC22AQ96IW7 307 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 IL17FQ96PD4 163 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 LGMNQ99538 433 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 MRPL45Q9BRJ2 306 aaKnown RBP3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 NICN1Q9BSH3 213 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 TRIM51Q9BSJ1 452 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 ELOVL4Q9GZR5 314 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 TMEM38AQ9H6F2 299 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 IL1RAPQ9NPH3 570 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 CTPS2Q9NRF8 586 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 SLC25A37Q9NYZ2 338 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 APOBEC3BQ9UH17 382 aaKnown RBP3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 CYB5R1Q9UHQ9 305 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 GNPTGQ9UJJ9 305 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 FBXL3Q9UKT7 428 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 CLEC4EQ9ULY5 219 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 ICAM5Q9UMF0 924 aa3.31□□□□□ -1.88
RNU4-60P-201ENST00000517239 IGLV3-22A0A075B6J6 115 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 A0A0A6YYD5 115 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 IQCMA0A1B0GVH7 501 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 ANKRD20A5PA0PJZ0 165 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 IGLON5A6NGN9 336 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 FAM166BA8MTA8 275 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 NPIPB9F8W1W9 429 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 M0QZ92 97 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 PGRMC1O00264 195 aaKnown RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 PDHXO00330 501 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 MBTPS2O43462 519 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 ATP8B1O43520 1251 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 NARSO43776 548 aaKnown RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 GJB5O95377 273 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 RAB3DO95716 219 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 PAK4O96013 591 aaPredicted RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 OXTP01178 125 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 TSHBP01222 138 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 IFNA5P01569 189 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 IGHV2-5P01817 119 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 CRYABP02511 175 aaKnown RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 PRSS2P07478 247 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 GIMD1P0DJR0 217 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 TNFRSF1BP20333 461 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 G0S2P27469 103 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 FCGR2CP31995 323 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 MAS1LP35410 378 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 TFPI2P48307 235 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 HOXA1P49639 335 aaPredicted RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 ATP4BP51164 291 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 GPM6AP51674 278 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 NKX2-5P52952 324 aaPredicted RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 UGT2B15P54855 530 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 FOXG1P55316 489 aaPredicted RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 NUP107P57740 925 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms