RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 INTS14Q96SY0 518 aa6.82□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TSC22D3Q99576 134 aa6.82□□□□□ -1.32
SCARNA20.1-201ENST00000516009 MNTQ99583 582 aa6.82□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SMAD5Q99717 465 aaKnown RBP6.82□□□□□ -1.32
SCARNA20.1-201ENST00000516009 EMC6Q9BV81 110 aa6.82□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SF3B5Q9BWJ5 86 aaKnown RBP6.82□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SRXN1Q9BYN0 137 aa6.82□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SLC6A15Q9H2J7 730 aa6.82□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ACKR4Q9NPB9 350 aa6.82□□□□□ -1.32
SCARNA20.1-201ENST00000516009 NDUFB11Q9NX14 153 aa6.82□□□□□ -1.32
SCARNA20.1-201ENST00000516009 KLHL13Q9P2N7 655 aa6.82□□□□□ -1.32
SCARNA20.1-201ENST00000516009 DNAJC13O75165 2243 aa6.82□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ZNF407Q9C0G0 2248 aa6.82□□□□□ -1.32
SCARNA20.1-201ENST00000516009 LOC100506127A0A0U1RQW1 187 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 A0A1W2PPW3 197 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SLC35F4A4IF30 521 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TVP23AA6NH52 213 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TRIM64BA6NI03 449 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 J3QLW9 94 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SMAD9O15198 467 aaKnown RBP6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CXCL13O43927 109 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ACTL6AO96019 429 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 HLA-DQA2P01906 255 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 PGA4P0DJD7 388 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 PGA3P0DJD8 388 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 NR2C1P13056 603 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CTLA4P16410 223 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ZNF19P17023 458 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 PSMA1P25786 263 aaKnown RBP6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 PCSK6P29122 969 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 LHX2P50458 406 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SH3BGRP55822 239 aaPredicted RBP6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CLDN15P56746 228 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CLDN17P56750 224 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CLDN18P56856 261 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TAS2R43P59537 309 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 RPS3AP61247 264 aaKnown RBP6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 LSM3P62310 102 aaKnown RBP6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 BDH1Q02338 343 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 GLO1Q04760 184 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 FMODQ06828 376 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 NFATC3Q12968 1075 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CAMK2DQ13557 499 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TPBGQ13641 420 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SSX1Q16384 188 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 BCL2A1Q16548 175 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 THEM4Q5T1C6 240 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 LIPKQ5VXJ0 399 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 VASNQ6EMK4 673 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 C19orf48Q6RUI8 117 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CREB3L2Q70SY1 520 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TRILQ7L0X0 811 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SSX6Q7RTT6 188 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ATCAYQ86WG3 371 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SPACA3Q8IXA5 215 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 PHC2Q8IXK0 858 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TIGD4Q8IY51 512 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ZADH2Q8N4Q0 377 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 NOXO1Q8NFA2 376 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 OR9K2Q8NGE7 335 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 OR6N2Q8NGY6 317 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 OR10D3Q8NH80 312 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 FNDC8Q8TC99 324 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SMAP2Q8WU79 429 aaPredicted RBP6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SNX33Q8WV41 574 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 RPL3LQ92901 407 aaKnown RBP6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ABTB1Q969K4 478 aaPredicted RBP6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CPNE4Q96A23 557 aaPredicted RBP6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ADGRG7Q96K78 797 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 C4orf36Q96KX1 117 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CHCHD6Q9BRQ6 235 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 DCUN1D5Q9BTE7 237 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 MFRPQ9BY79 579 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 MRPL13Q9BYD1 178 aaKnown RBP6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 DEFB127Q9H1M4 99 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 OR51E2Q9H255 320 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 LDAHQ9H6V9 325 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 EXO5Q9H790 373 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 MARCH7Q9H992 704 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ISG20L2Q9H9L3 353 aaKnown RBP6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TRIM36Q9NQ86 728 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 BABAM2Q9NXR7 383 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SSUH2Q9Y2M2 353 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 COA3Q9Y2R0 106 aaPredicted RBP6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 PCDHGA9Q9Y5G4 932 aaKnown RBP6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CSAG2Q9Y5P2 127 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TMEM14AQ9Y6G1 99 aa6.81□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TRGV5A0A0B4J1U4 118 aa6.8□□□□□ -1.32
SCARNA20.1-201ENST00000516009 PNMA8CA0A1B0GUJ8 204 aa6.8□□□□□ -1.32
SCARNA20.1-201ENST00000516009 PHYHO14832 338 aa6.8□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TFECO14948 347 aaPredicted RBP6.8□□□□□ -1.32
SCARNA20.1-201ENST00000516009 RRP8O43159 456 aaKnown RBP6.8□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SYNGR4O95473 234 aa6.8□□□□□ -1.32
SCARNA20.1-201ENST00000516009 GPANK1O95872 356 aa6.8□□□□□ -1.32
SCARNA20.1-201ENST00000516009 LALBAP00709 142 aa6.8□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SPARCP09486 303 aa6.8□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ZNF823P16415 610 aa6.8□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ZNF708P17019 499 aa6.8□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ZNF24P17028 368 aa6.8□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CELP19835 753 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms