RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 TIMP2P16035 220 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 ACKR3P25106 362 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 P2RX3P56373 397 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 OPN5Q6U736 354 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 DBX2Q6ZNG2 339 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 OR1S2Q8NGQ3 325 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 CPEB1Q9BZB8 566 aaKnown RBP12.27□□□□□ -0.45
TCOF1-214ENST00000515035 LINC00597Q9H2U6 94 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 AKIP1Q9NQ31 210 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 BTAF1O14981 1849 aa12.27□□□□□ -0.45
TCOF1-214ENST00000515035 TAF9Q16594 264 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 AANATQ16613 207 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 DLEU7Q6UYE1 221 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 GDF7Q7Z4P5 450 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 DMBX1Q8NFW5 382 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 ISG20Q96AZ6 181 aaKnown RBP12.26□□□□□ -0.45
TCOF1-214ENST00000515035 NKX3-1Q99801 234 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-214ENST00000515035 A4GALTQ9NPC4 353 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 MAP1BP46821 2468 aaKnown RBP12.26□□□□□ -0.45
TCOF1-214ENST00000515035 LGALS8O00214 317 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 DCTN6O00399 190 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 AADACP22760 399 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 ITGB7P26010 798 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 SELENBP1Q13228 472 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 LKAAEAR1Q8TD35 194 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 FGF13Q92913 245 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 CDCA4Q9BXL8 241 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 PRSS16Q9NQE7 514 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 MRPL22Q9NWU5 206 aaKnown RBP12.26□□□□□ -0.45
TCOF1-214ENST00000515035 NDUFB11Q9NX14 153 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 ACAD8Q9UKU7 415 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 NHSL1Q5SYE7 1610 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 A0A1B0GWA3 101 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 OR6C68A6NDL8 312 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 ZNF587BE7ETH6 402 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 XRCC3O43542 346 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 ITGBL1O95965 494 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-214ENST00000515035 OTX2P32243 289 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 DSC1Q08554 894 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 FAM26DQ5JW98 314 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 CLEC9AQ6UXN8 241 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 HTR3DQ70Z44 454 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 PRICKLE2Q7Z3G6 844 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 NKAIN3Q8N8D7 197 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 CLRN3Q8NCR9 226 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 APOOQ9BUR5 198 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 HCFC1R1Q9NWW0 138 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 CDC14CA4D256 554 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 LRP5LA4QPB2 252 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 CSF3P09919 207 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 EN2P19622 333 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-214ENST00000515035 IKZF1Q13422 519 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 CLSTN3Q9BQT9 956 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 KLF16Q9BXK1 252 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-214ENST00000515035 GAREM1Q9H706 876 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 TRAPPC2LQ9UL33 140 aa12.26□□□□□ -0.45
TCOF1-214ENST00000515035 CBY3A6NI87 242 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 JTBO76095 146 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 LPLP06858 475 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 CLDN20P56880 219 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 PCBD1P61457 104 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 PHLDA2Q53GA4 152 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 NPSR1Q6W5P4 371 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 PARS2Q7L3T8 475 aaKnown RBP12.25□□□□□ -0.45
TCOF1-214ENST00000515035 ULBP3Q9BZM4 244 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 NDRG3Q9UGV2 375 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 FAM155AB1AL88 458 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-214ENST00000515035 ST8SIA3O43173 380 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 ANGPTL7O43827 346 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 EDIL3O43854 480 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 PDGFBP01127 241 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-214ENST00000515035 NME1P15531 152 aaKnown RBP12.25□□□□□ -0.45
TCOF1-214ENST00000515035 MAOBP27338 520 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 ECI1P42126 302 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 RAD52P43351 418 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 RFX2P48378 723 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 RPS15P62841 145 aaKnown RBP12.25□□□□□ -0.45
TCOF1-214ENST00000515035 PMPCAQ10713 525 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 SLC10A1Q14973 349 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 SIGIRRQ6IA17 410 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 TMEM182Q6ZP80 229 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-214ENST00000515035 SLCO4C1Q6ZQN7 724 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 Q6ZRG5 221 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 OVCH1Q7RTY7 1134 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 GRAMD2AQ8IUY3 354 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 ZNF561Q8N587 486 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 OR13C8Q8NGS7 320 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 PRR14Q9BWN1 585 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 MYH4Q9Y623 1939 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 TAAR5O14804 337 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 PVRP15151 417 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 HOXC13P31276 330 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 DPY19L2P2Q6ZN68 376 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 HLA-CQ95604 372 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 SLCO4A1Q96BD0 722 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 FGGYQ96C11 551 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 NEURL2Q9BR09 285 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 ABHD6Q9BV23 337 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 CHST8Q9H2A9 424 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 HIPK2Q9H2X6 1198 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms