RNA–Protein interactions for RNA: ENST00000514665.1

USP53-209, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,233 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-209ENST00000514665 AKR7A2O43488 359 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 C1QBP02746 253 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 FCGR2AP12318 317 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 GDF1P27539 372 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 ECH1Q13011 328 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 SHHQ15465 462 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 UNQ6126/PRO20091Q6UXV3 157 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 ZNF793Q6ZN11 406 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 CMTM1Q8IZ96 169 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 PHYHIPQ92561 330 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 RADILQ96JH8 1075 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 LINC00615Q96LM1 132 aaPredicted RBP11.62□□□□□ -0.55
USP53-209ENST00000514665 CTRCQ99895 268 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 CMSS1Q9BQ75 279 aaKnown RBP11.62□□□□□ -0.55
USP53-209ENST00000514665 OBP2AQ9NY56 170 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 SERGEFQ9UGK8 458 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 IFNGR1P15260 489 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 DIO1P49895 249 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 ATOH1Q92858 354 aaPredicted RBP11.62□□□□□ -0.55
USP53-209ENST00000514665 MRGPRX1Q96LB2 322 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 STEAP1Q9UHE8 339 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 FLVCR2Q9UPI3 526 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 C1orf196B1AJZ1 125 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 ZNF749O43361 778 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 EIF4EP06730 217 aaKnown RBP11.62□□□□□ -0.55
USP53-209ENST00000514665 PPP3CBP16298 524 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 ZNF93P35789 620 aaPredicted RBP11.62□□□□□ -0.55
USP53-209ENST00000514665 AGBL4Q5VU57 503 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 CD276Q5ZPR3 534 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 CORO6Q6QEF8 472 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 BAHD1Q8TBE0 780 aaPredicted RBP11.62□□□□□ -0.55
USP53-209ENST00000514665 TSLPQ969D9 159 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 VRK1Q99986 396 aaPredicted RBP11.62□□□□□ -0.55
USP53-209ENST00000514665 SLC25A19Q9HC21 320 aa11.62□□□□□ -0.55
USP53-209ENST00000514665 CCSO14618 274 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 SIGLEC6O43699 453 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 AKR7A3O95154 331 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 S100A11P31949 105 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 BTG1P62324 171 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 DYRK1AQ13627 763 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 LILRB2Q8N423 598 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 ESX1Q8N693 406 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 SLAMF9Q96A28 289 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 DERL3Q96Q80 235 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 SPIN2AQ99865 258 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 SPIN2BQ9BPZ2 258 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 EMC7Q9NPA0 242 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 SLAMF7Q9NQ25 335 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 KCNIP1Q9NZI2 227 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 OR52A1Q9UKL2 312 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 NEU3Q9UQ49 428 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 FTCDNL1E5RQL4 147 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 M6PRP20645 277 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 HTR5AP47898 357 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 CDC20Q12834 499 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 MFAP5Q13361 173 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 INSL4Q14641 139 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 ESCO2Q56NI9 601 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 SLC35D3Q5M8T2 416 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 MANEAQ5SRI9 462 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 CLVS2Q5SYC1 327 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 PLCXD3Q63HM9 321 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 KIRREL2Q6UWL6 708 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 RHOUQ7L0Q8 258 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 ANGPTL5Q86XS5 388 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 OR4D6Q8NGJ1 314 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 OR6M1Q8NGM8 313 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 FGF14Q92915 247 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 RSPRY1Q96DX4 576 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 GSX2Q9BZM3 304 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 CDH20Q9HBT6 801 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 ANKRD10Q9NXR5 420 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 TMPRSS11EQ9UL52 423 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 GABARAPH6UMI1 98 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 POU3F2P20265 443 aaPredicted RBP11.61□□□□□ -0.55
USP53-209ENST00000514665 KIR2DL3P43628 341 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 ACKR1Q16570 336 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 OR10K2Q6IF99 312 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 LILRA6Q6PI73 481 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 MOB3CQ70IA8 216 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 BCORP1Q8N888 145 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 OR1S1Q8NH92 325 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 NAT6Q93015 286 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 MIB2Q96AX9 1013 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 SPACA5Q96QH8 159 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 ZFP57Q9NU63 452 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 SCN3AQ9NY46 2000 aa11.61□□□□□ -0.55
USP53-209ENST00000514665 ZFC3H1O60293 1989 aaKnown RBP11.6□□□□□ -0.55
USP53-209ENST00000514665 ARRDC5A6NEK1 342 aa11.6□□□□□ -0.55
USP53-209ENST00000514665 TRAPPC2P0DI81 140 aa11.6□□□□□ -0.55
USP53-209ENST00000514665 TRAPPC2BP0DI82 140 aa11.6□□□□□ -0.55
USP53-209ENST00000514665 GLI4P10075 376 aa11.6□□□□□ -0.55
USP53-209ENST00000514665 DPP4P27487 766 aa11.6□□□□□ -0.55
USP53-209ENST00000514665 RPS18P62269 152 aaKnown RBP11.6□□□□□ -0.55
USP53-209ENST00000514665 MPEG1Q2M385 716 aa11.6□□□□□ -0.55
USP53-209ENST00000514665 TMEM81Q6P7N7 255 aa11.6□□□□□ -0.55
USP53-209ENST00000514665 CAMKMTQ7Z624 323 aa11.6□□□□□ -0.55
USP53-209ENST00000514665 CMIPQ8IY22 773 aa11.6□□□□□ -0.55
USP53-209ENST00000514665 OR4N2Q8NGD1 307 aa11.6□□□□□ -0.55
USP53-209ENST00000514665 GOT1L1Q8NHS2 421 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms