RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 NIPA1Q7RTP0 329 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 FAM228AQ86W67 206 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 Q8N976 141 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 SMIM10Q96HG1 83 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 OSBPL10Q9BXB5 764 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 CWH43Q9H720 699 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 PSG11Q9UQ72 335 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 WDR62O43379 1518 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 IGLV11-55A0A075B6I3 123 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 HIDE1A8MVS5 230 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 RSPH10B2B2RC85 870 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 XKRYO14609 159 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 RTL8CO15255 209 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 SOX15O60248 233 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 PALMO75781 387 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 EIF3GO75821 320 aaKnown RBP eCLIP3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 UTS2O95399 124 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 NDUFB10O96000 172 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 FGGP02679 453 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 ZDHHC11BP0C7U3 371 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 RSPH10BP0C881 870 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 ZNF823P16415 610 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 UGT2B15P54855 530 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 HERVK_113P61574 105 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 SLC7A9P82251 487 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 TGFBIQ15582 683 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 RNASEKQ6P5S7 137 aaKnown RBP3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 ZNF836Q6ZNA1 936 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 PCP2Q8IVA1 136 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 OR1S2Q8NGQ3 325 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 AKR7LQ8NHP1 331 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 ZFP90Q8TF47 636 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 TCHPQ9BT92 498 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 VCXQ9H320 206 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 PATZ1Q9HBE1 687 aaKnown RBP3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 TM9SF3Q9HD45 589 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 ETNK2Q9NVF9 386 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 KIAA1257Q9ULG3 409 aa3.11□□□□□ -1.91
HMGCS1-207ENST00000514610 PIKFYVEQ9Y2I7 2098 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 CIB4A0PJX0 185 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 XKRY2A2RUG3 117 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 H0Y8G0 127 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 DLGAP1O14490 977 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 PPP1R2P9O14990 202 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 C6orf47O95873 294 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 CRYGBP07316 175 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 TLX1NBP0CAT3 122 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 OMGP23515 440 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 IFNA8P32881 189 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 SERPINB5P36952 375 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 RPS9P46781 194 aaKnown RBP3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 SULT1E1P49888 294 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 MRPS22P82650 360 aaKnown RBP3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 PON3Q15166 354 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 MREGQ8N565 214 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 CEP112Q8N8E3 955 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 KCNG3Q8TAE7 436 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 STARD8Q92502 1023 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 STMN2Q93045 179 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 TSSK3Q96PN8 268 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 RPF2Q9H7B2 306 aaKnown RBP3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 LHX9Q9NQ69 397 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 STARD10Q9Y365 291 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 ZNFX1Q9P2E3 1918 aaKnown RBP3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 CNTNAP1P78357 1384 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 MYO10Q9HD67 2058 aa3.1□□□□□ -1.91
HMGCS1-207ENST00000514610 SPECC1L-ADORA2AF8WAN1 911 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 KMOO15229 486 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 ANGPTL7O43827 346 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 SNX4O95219 450 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 RPS2P15880 293 aaKnown RBP3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 HRH1P35367 487 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 UBE2AP49459 152 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 ACTA1P68133 377 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 SSX2Q16385 188 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 DEFB116Q30KQ4 102 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 KHDRBS2Q5VWX1 349 aaKnown RBP3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 SPECC1LQ69YQ0 1117 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 TMEM107Q6UX40 140 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 H2AFVQ71UI9 128 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 STRADAQ7RTN6 431 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 TMEM135Q86UB9 458 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 CDH26Q8IXH8 852 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 B3GNT7Q8NFL0 401 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 SLC2A14Q8TDB8 520 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 SH3GL3Q99963 347 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 MRPL37Q9BZE1 423 aaKnown RBP3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 SLC40A1Q9NP59 571 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 SLC2A8Q9NY64 477 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 PSMC3IPQ9P2W1 217 aaPredicted RBP3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 LSM7Q9UK45 103 aaKnown RBP3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 MRPS18BQ9Y676 258 aaKnown RBP3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 ASTN1O14525 1302 aa3.09□□□□□ -1.91
HMGCS1-207ENST00000514610 TET2Q6N021 2002 aaPredicted RBP3.09□□□□□ -1.92
HMGCS1-207ENST00000514610 TRAV39A0A0B4J263 110 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 ZNF716A6NP11 495 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 F6UB75 175 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 H0YHG0 523 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 DFNA5O60443 496 aa3.08□□□□□ -1.92
HMGCS1-207ENST00000514610 TSPAN13O95857 204 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms