RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	OXGR1	Q96P68	337 aa		2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	SIGLEC12	Q96PQ1	595 aa		2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	PANX2	Q96RD6	677 aa		2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	HIST1H4G	Q99525	98 aa		2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	KIR2DL4	Q99706	377 aa		2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	GAL3ST1	Q99999	423 aa		2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	LZTS2	Q9BRK4	669 aa		2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	PAXX	Q9BUH6	204 aa		2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	SUDS3	Q9H7L9	328 aa	Predicted RBP	2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	ISG20L2	Q9H9L3	353 aa	Known RBP	2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	FOLH1B	Q9HBA9	442 aa		2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	ZNF160	Q9HCG1	818 aa		2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	C6orf50	Q9HD87	102 aa		2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	RMND1	Q9NWS8	449 aa		2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	THUMPD1	Q9NXG2	353 aa	Known RBP	2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	TP53TG3	Q9ULZ0	132 aa		2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	COL16A1	Q07092	1604 aa	Predicted RBP	2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	COL22A1	Q8NFW1	1626 aa	Predicted RBP	2.59	□□□□□ -1.99
CALCOCO2-223	ENST00000514267	MROH7-TTC4	A0A0A0MT08	1334 aa		2.59	□□□□□ -2
CALCOCO2-223	ENST00000514267	C4A	P0C0L4	1744 aa		2.59	□□□□□ -2
CALCOCO2-223	ENST00000514267	C4B	P0C0L5	1744 aa		2.59	□□□□□ -2
CALCOCO2-223	ENST00000514267	DDX60	Q8IY21	1712 aa	Known RBP	2.59	□□□□□ -2
CALCOCO2-223	ENST00000514267	WNK3	Q9BYP7	1800 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	MYO5A	Q9Y4I1	1855 aa	Known RBP	2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	AKAP11	Q9UKA4	1901 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	IGHV1OR21-1	A0A087WYE8	117 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	SMCO2	A6NFE2	343 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	NCF1B	A6NI72	391 aa	Predicted RBP	2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	NCF1C	A8MVU1	366 aa	Predicted RBP	2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	GFY	I3L273	518 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	PHF1	O43189	567 aa	Predicted RBP	2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	PSTPIP1	O43586	416 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	ZNF354A	O60765	605 aa	Predicted RBP	2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	TBL1X	O60907	577 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	OR7A10	O76100	309 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	OR2F2	O95006	317 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	LGI1	O95970	557 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267		P04436	131 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	GOLGA8H	P0CJ92	632 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	TBP	P20226	339 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	NPR2	P20594	1047 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	SHC1	P29353	583 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	LONP1	P36776	959 aa	Known RBP	2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	BTD	P43251	543 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	SPAG1	Q07617	926 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	MAB21L1	Q13394	359 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	TGFBI	Q15582	683 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	PRR30	Q53SZ7	412 aa	Predicted RBP	2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	BAIAP2L2	Q6UXY1	529 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	OTUD6A	Q7L8S5	288 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	VRK2	Q86Y07	508 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	MARCH9	Q86YJ5	346 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	APOBEC3F	Q8IUX4	373 aa	Known RBP	2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	NAXD	Q8IW45	347 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	BLID	Q8IZY5	108 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	FTMT	Q8N4E7	242 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	MNS1	Q8NEH6	495 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	OR6C4	Q8NGE1	309 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	OR13F1	Q8NGS4	319 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	FAM110B	Q8TC76	370 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	PYROXD1	Q8WU10	500 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	DNAJA4	Q8WW22	397 aa	Predicted RBP	2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	GIMAP1	Q8WWP7	306 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	STARD8	Q92502	1023 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	GSDMA	Q96QA5	445 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	KLHDC3	Q9BQ90	382 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	C20orf24	Q9BUV8	137 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	RNF126	Q9BV68	326 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	IQCG	Q9H095	443 aa	Known RBP	2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	BLZF1	Q9H2G9	400 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	KCNIP3	Q9Y2W7	256 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	NRAP	Q86VF7	1730 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	ARAP2	Q8WZ64	1704 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	GON4L	Q3T8J9	2241 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	CHD4	Q14839	1912 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	SLIT2	O94813	1529 aa		2.58	□□□□□ -2
CALCOCO2-223	ENST00000514267	LAMB2	P55268	1798 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	DOCK2	Q92608	1830 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	LINC00854	A0A1B0GVQ3	168 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	OR2AG2	A6NM03	316 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	USP27X	A6NNY8	438 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	SRRM5	B3KS81	715 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	SOX15	O60248	233 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	DFNA5	O60443	496 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	SERF1A	O75920	110 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	H6PD	O95479	791 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	C1orf105	O95561	183 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	STAMBP	O95630	424 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	C2	P06681	752 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	KLK3	P07288	261 aa	Predicted RBP	2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	STAG3L3	P0CL85	134 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	ZNF24	P17028	368 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	GDF1	P27539	372 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	CASP1	P29466	404 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	RRM2	P31350	389 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	HNRNPH3	P31942	346 aa	Known RBP	2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	RDX	P35241	583 aa	Known RBP	2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	MDH2	P40926	338 aa	Known RBP	2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	KIR2DS4	P43632	304 aa		2.57	□□□□□ -2
CALCOCO2-223	ENST00000514267	TFPI2	P48307	235 aa		2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms