RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 ST20-AS1Q8NBB2 130 aa0.72□□□□□ -2.29
PDGFC-208ENST00000512711 OR4K5Q8NGD3 323 aa0.72□□□□□ -2.29
PDGFC-208ENST00000512711 FAM110BQ8TC76 370 aa0.72□□□□□ -2.29
PDGFC-208ENST00000512711 C15orf40Q8WUR7 153 aa0.72□□□□□ -2.29
PDGFC-208ENST00000512711 UBE2E3Q969T4 207 aa0.72□□□□□ -2.29
PDGFC-208ENST00000512711 MS4A4EQ96PG1 132 aa0.72□□□□□ -2.29
PDGFC-208ENST00000512711 CCT7Q99832 543 aa0.72□□□□□ -2.29
PDGFC-208ENST00000512711 FAIM2Q9BWQ8 316 aa0.72□□□□□ -2.29
PDGFC-208ENST00000512711 FN3KRPQ9HA64 309 aa0.72□□□□□ -2.29
PDGFC-208ENST00000512711 MCCC2Q9HCC0 563 aa0.72□□□□□ -2.29
PDGFC-208ENST00000512711 RAB18Q9NP72 206 aa0.72□□□□□ -2.29
PDGFC-208ENST00000512711 ADAP2Q9NPF8 381 aa0.72□□□□□ -2.29
PDGFC-208ENST00000512711 EXD2Q9NVH0 621 aa0.72□□□□□ -2.29
PDGFC-208ENST00000512711 KLHL28Q9NXS3 571 aa0.72□□□□□ -2.29
PDGFC-208ENST00000512711 PCSK1NQ9UHG2 260 aa0.72□□□□□ -2.29
PDGFC-208ENST00000512711 POLDIP2Q9Y2S7 368 aa0.72□□□□□ -2.29
PDGFC-208ENST00000512711 SAMHD1Q9Y3Z3 626 aaKnown RBP0.72□□□□□ -2.29
PDGFC-208ENST00000512711 SF3B1O75533 1304 aaKnown RBP eCLIP0.71□□□□□ -2.3
PDGFC-208ENST00000512711 RNF103-CHMP3A0A140T963 221 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 TRIM64A6NGJ6 449 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 TRIM64BA6NI03 449 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 OR5B21A6NL26 309 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 A8MXQ7 604 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 F5H6K3 240 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 PRRG1O14668 218 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 YIF1AO95070 293 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 UTS2O95399 124 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 IGHDP01880 384 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 C1GALT1C1LP0DN25 315 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 CD99P14209 185 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 PAX7P23759 505 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 IL12AP29459 219 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 CA8P35219 290 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 CDKN1BP46527 198 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 CAMLGP49069 296 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 SUB1P53999 127 aaKnown RBP eCLIP0.71□□□□□ -2.3
PDGFC-208ENST00000512711 ERVK-25P63136 954 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 KLRC3Q07444 240 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 SELPLGQ14242 412 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 PIGHQ14442 188 aaPredicted RBP0.71□□□□□ -2.3
PDGFC-208ENST00000512711 HCP5Q6MZN7 132 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 ABHD13Q7L211 337 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 PLA2G4DQ86XP0 818 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 PUSL1Q8N0Z8 303 aaKnown RBP0.71□□□□□ -2.3
PDGFC-208ENST00000512711 TMEM123Q8N131 208 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 TMEM105Q8N8V8 129 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 SYT14Q8NB59 555 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 CNNM3Q8NE01 707 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 C1orf64Q8NEQ6 169 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 NOXO1Q8NFA2 376 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 COQ8AQ8NI60 647 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 ABHD3Q8WU67 409 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 CAMK2N2Q96S95 79 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 KCNK16Q96T55 309 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 RARRES2Q99969 163 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 TUBGCP2Q9BSJ2 902 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 OSBPL10Q9BXB5 764 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 MRPL37Q9BZE1 423 aaKnown RBP0.71□□□□□ -2.3
PDGFC-208ENST00000512711 ISYNA1Q9NPH2 558 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 KCNIP3Q9Y2W7 256 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 TIMM10BQ9Y5J6 103 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 TSSC4Q9Y5U2 329 aaPredicted RBP0.71□□□□□ -2.3
PDGFC-208ENST00000512711 CAMTA1Q9Y6Y1 1673 aa0.71□□□□□ -2.3
PDGFC-208ENST00000512711 TSPOAP1O95153 1857 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 IGHV3OR16-8A0A075B7F1 116 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 A0A087WZY1 265 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 C5orf63A6NC05 138 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 ZNF716A6NP11 495 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 J3QRE1 110 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 SEC22BO75396 215 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 CD74P04233 296 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 HLA-DPB1P04440 258 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 GLAP06280 429 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 SLC2A5P22732 501 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 AK4P27144 223 aaPredicted RBP0.7□□□□□ -2.3
PDGFC-208ENST00000512711 LAP3P28838 519 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 RORAP35398 523 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 CEACAM6P40199 344 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 GMFBP60983 142 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 ARG2P78540 354 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 PRKCDQ05655 676 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 KLRB1Q12918 225 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 MAB21L1Q13394 359 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 PON2Q15165 354 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 RABL6Q3YEC7 729 aaPredicted RBP0.7□□□□□ -2.3
PDGFC-208ENST00000512711 USH1GQ495M9 461 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 TMEM41BQ5BJD5 291 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 CENPLQ8N0S6 344 aaPredicted RBP0.7□□□□□ -2.3
PDGFC-208ENST00000512711 HDDC3Q8N4P3 179 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 TMEM104Q8NE00 496 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 OR4S2Q8NH73 311 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 C17orf50Q8WW18 174 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 MAIP1Q8WWC4 291 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 FLYWCH2Q96CP2 140 aaKnown RBP0.7□□□□□ -2.3
PDGFC-208ENST00000512711 KLF6Q99612 283 aaPredicted RBP0.7□□□□□ -2.3
PDGFC-208ENST00000512711 OMDQ99983 421 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 NHEJ1Q9H9Q4 299 aaPredicted RBP0.7□□□□□ -2.3
PDGFC-208ENST00000512711 PALMDQ9NP74 551 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 TRIP11Q15643 1979 aa0.7□□□□□ -2.3
PDGFC-208ENST00000512711 NACADO15069 1562 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms