RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 SMIM11AP58511 58 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 RPL27P61353 136 aaKnown RBP12.16□□□□□ -0.46
DDX41-212ENST00000511040 ADAM8P78325 824 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 NKX6-1P78426 367 aaPredicted RBP12.16□□□□□ -0.46
DDX41-212ENST00000511040 FMODQ06828 376 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 CD47Q08722 323 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 ZBED5Q49AG3 693 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 C1QTNF12Q5T7M4 302 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 LCN8Q6JVE9 175 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 HDDC2Q7Z4H3 204 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 KRTAP1-3Q8IUG1 177 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 SKA3Q8IX90 412 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 WFDC11Q8NEX6 87 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 FGFBP3Q8TAT2 258 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 RSRC1Q96IZ7 334 aaKnown RBP12.16□□□□□ -0.46
DDX41-212ENST00000511040 GPA33Q99795 319 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 SH3GL3Q99963 347 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 KCNS3Q9BQ31 491 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 KATNB1Q9BVA0 655 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 C1orf21Q9H246 121 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 MUC13Q9H3R2 512 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 TMEM38BQ9NVV0 291 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 CRNNQ9UBG3 495 aaPredicted RBP12.16□□□□□ -0.46
DDX41-212ENST00000511040 IL20RAQ9UHF4 553 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 AURKCQ9UQB9 309 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 ADAM18Q9Y3Q7 739 aa12.16□□□□□ -0.46
DDX41-212ENST00000511040 IGKV1D-43A0A0B4J1Z2 117 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 UNC119BA6NIH7 251 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 H7C1C5 153 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 IGLV1-44P01699 117 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 CD8AP01732 235 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 IGHMP01871 453 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 CALCRP30988 508 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 CDKN1AP38936 164 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 PTDSS1P48651 473 aaKnown RBP12.15□□□□□ -0.46
DDX41-212ENST00000511040 PTH2RP49190 550 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 FABP6P51161 128 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 LCN6P62502 163 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 NAAAQ02083 359 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 HIST3H3Q16695 136 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 GSG1Q2KHT4 349 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 MTX3Q5HYI7 312 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 Q5PR19 223 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 ZNF627Q7L945 461 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 SLC22A24Q8N4F4 322 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 SLC7A6OSQ96CW6 309 aaPredicted RBP12.15□□□□□ -0.46
DDX41-212ENST00000511040 LRGUKQ96M69 825 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 DHRS9Q9BPW9 319 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 CXorf56Q9H5V9 222 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 B3GNT2Q9NY97 397 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 ZNF224Q9NZL3 707 aa12.15□□□□□ -0.46
DDX41-212ENST00000511040 CELSR1Q9NYQ6 3014 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 USF3Q68DE3 2245 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 NPIPB13A6NJU9 1138 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 NPIPB4C9JG80 1138 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 ACOT8O14734 319 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 OR10H3O60404 316 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 PTP4A3O75365 173 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 IGKV3-15P01624 115 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 CRYAAP02489 173 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 CD14P08571 375 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 CDAP32320 146 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 ARR3P36575 388 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 GIPRP48546 466 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 ZNF84P51523 738 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 ATP5J2P56134 94 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 PPP1R8Q12972 351 aaKnown RBP12.14□□□□□ -0.47
DDX41-212ENST00000511040 TAF11Q15544 211 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 ANKDD1AQ495B1 522 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 DNAL1Q4LDG9 190 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 VHLLQ6RSH7 139 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 THSD4Q6ZMP0 1018 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 PIWIL3Q7Z3Z3 882 aaKnown RBP12.14□□□□□ -0.47
DDX41-212ENST00000511040 ZER1Q7Z7L7 766 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 TGIF2LYQ8IUE0 185 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 CCDC36Q8IYA8 594 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 ZNF519Q8TB69 540 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 NMD3Q96D46 503 aaKnown RBP12.14□□□□□ -0.47
DDX41-212ENST00000511040 ASB9Q96DX5 294 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 MS4A3Q96HJ5 214 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 Q96M85 177 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 KCNK17Q96T54 332 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 TRAF4Q9BUZ4 470 aaPredicted RBP12.14□□□□□ -0.47
DDX41-212ENST00000511040 KRCC1Q9NPI7 259 aaPredicted RBP12.14□□□□□ -0.47
DDX41-212ENST00000511040 STX18Q9P2W9 335 aaKnown RBP12.14□□□□□ -0.47
DDX41-212ENST00000511040 TMCC3Q9ULS5 477 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 SIGLEC7Q9Y286 467 aa12.14□□□□□ -0.47
DDX41-212ENST00000511040 A6NIZ1 184 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 CENPBD1B2RD01 187 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 TNFRSF11BO00300 401 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 ARHGEF9O43307 516 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 NDUFB2O95178 105 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 STAMBPO95630 424 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 OR8G3PP0DMU2 310 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 TTKP33981 857 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 ERFP50548 548 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 FXYD6P3P58550 94 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 RAP1BP61224 184 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 RAB1AP62820 205 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 RAP1AP62834 184 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms