RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 FKBP7Q9Y680 259 aa13.99□□□□□ -0.17
LMNA-222ENST00000508500 LOC100653049A0A140TA62 436 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 LOC390937A0A1W2PQ73 354 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 NDUFS8O00217 210 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 KRT34O76011 436 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 FUT4P22083 530 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 GIPRP48546 466 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 UGT2B15P54855 530 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 RAB1AP62820 205 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 DAG1Q14118 895 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 CHRFAM7AQ494W8 412 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 INTS11Q5TA45 600 aaKnown RBP13.98□□□□□ -0.17
LMNA-222ENST00000508500 CARM1Q86X55 608 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 IL17RDQ8NFM7 739 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 OR8J3Q8NGG0 315 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 PFN4Q8NHR9 129 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 MPP4Q96JB8 637 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 PIMREGQ9BSJ6 248 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 MRPL37Q9BZE1 423 aaKnown RBP13.98□□□□□ -0.17
LMNA-222ENST00000508500 BPESC1Q9GZL8 116 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 B3GAT2Q9NPZ5 323 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 GMPR2Q9P2T1 348 aaKnown RBP13.98□□□□□ -0.17
LMNA-222ENST00000508500 ZNF229Q9UJW7 825 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 SH3GLB1Q9Y371 365 aa13.98□□□□□ -0.17
LMNA-222ENST00000508500 SH3PXD2BA1X283 911 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 GSC2O15499 205 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 STAMBPO95630 424 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 PGA4P0DJD7 388 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 PGA3P0DJD8 388 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 PTDSS1P48651 473 aaKnown RBP13.97□□□□□ -0.17
LMNA-222ENST00000508500 MXRA7P84157 204 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 RUNX1T1Q06455 604 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 RAB39AQ14964 217 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 CARTPTQ16568 116 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 MMEL1Q495T6 779 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 LRP11Q86VZ4 500 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 RBM15BQ8NDT2 890 aaKnown RBP13.97□□□□□ -0.17
LMNA-222ENST00000508500 TMEM255BQ8WV15 326 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 MSI2Q96DH6 328 aaKnown RBP13.97□□□□□ -0.17
LMNA-222ENST00000508500 KCNK17Q96T54 332 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 SLC19A3Q9BZV2 496 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 C20orf141Q9NUB4 165 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 GID8Q9NWU2 228 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 TMEM160Q9NX00 188 aa13.97□□□□□ -0.17
LMNA-222ENST00000508500 PRPF19Q9UMS4 504 aaKnown RBP13.97□□□□□ -0.17
LMNA-222ENST00000508500 LYNX1G3V0Z9 82 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 MRASO14807 208 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 RNF13O43567 381 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 OR6A2O95222 327 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 MT-ND1P03886 318 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 TSPAN19P0C672 248 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 LYNX1P0DP58 116 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 IGFBP5P24593 272 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 GIFP27352 417 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 OR1E2P47887 323 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 RPL18Q07020 188 aaKnown RBP13.96□□□□□ -0.17
LMNA-222ENST00000508500 PIN1Q13526 163 aaPredicted RBP13.96□□□□□ -0.17
LMNA-222ENST00000508500 FXNQ16595 210 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 HIST3H3Q16695 136 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 SPATS1Q496A3 300 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 PODNL1Q6PEZ8 512 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 RINLQ6ZS11 566 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 PIWIL3Q7Z3Z3 882 aaKnown RBP13.96□□□□□ -0.17
LMNA-222ENST00000508500 PGAM4Q8N0Y7 254 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 SLC22A24Q8N4F4 322 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 POU5F2Q8N7G0 328 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 RASSF5Q8WWW0 418 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 ZNF566Q969W8 418 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 MRPL24Q96A35 216 aaKnown RBP13.96□□□□□ -0.17
LMNA-222ENST00000508500 MCUR1Q96AQ8 359 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 SLC25A44Q96H78 314 aaPredicted RBP13.96□□□□□ -0.17
LMNA-222ENST00000508500 SH3GL3Q99963 347 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 HOPXQ9BPY8 73 aaPredicted RBP13.96□□□□□ -0.17
LMNA-222ENST00000508500 ECSITQ9BQ95 431 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 RAB1BQ9H0U4 201 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 MYOZ1Q9NP98 299 aaPredicted RBP13.96□□□□□ -0.17
LMNA-222ENST00000508500 TMEM38BQ9NVV0 291 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 MYEF2Q9P2K5 600 aaKnown RBP13.96□□□□□ -0.17
LMNA-222ENST00000508500 RIMS3Q9UJD0 308 aa13.96□□□□□ -0.17
LMNA-222ENST00000508500 LRP5LA4QPB2 252 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 BLOC1S5-TXNDC5H3BN57 136 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 DHHO43323 396 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 LMX1BO60663 402 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 UBL3O95164 117 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 F13BP05160 661 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 ADRA2AP08913 450 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 QDPRP09417 244 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 FAM157CP0CG43 387 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 UMPSP11172 480 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 DAOP14920 347 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 FUT1P19526 365 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 IL2RGP31785 369 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 GLRXP35754 106 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 GZMKP49863 264 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 DEF8Q6ZN54 512 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 NEU4Q8WWR8 484 aaPredicted RBP13.95□□□□□ -0.18
LMNA-222ENST00000508500 ZNF347Q96SE7 839 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 SEPHS2Q99611 448 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 SH3GL1Q99961 368 aa13.95□□□□□ -0.18
LMNA-222ENST00000508500 MRPL13Q9BYD1 178 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms