RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 SOX2P48431 317 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 ATP1B3P54709 279 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 MTPNP58546 118 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 RNF4P78317 190 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 SLC35A1P78382 337 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 RELBQ01201 579 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 TGFBIQ15582 683 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 PCGF3Q3KNV8 242 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 DCST2Q5T1A1 773 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 ABHD17CQ6PCB6 329 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 IZUMO2Q6UXV1 221 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 MUC6Q6W4X9 2439 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 C12orf54Q6X4T0 127 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 C16orf47Q6ZP98 133 aaPredicted RBP2.7□□□□□ -1.98
NEDD4-208ENST00000508342 MDGA2Q7Z553 956 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 SYT14Q8NB59 555 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 BBS1Q8NFJ9 593 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 OR4F15Q8NGB8 312 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 OR4K1Q8NGD4 311 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 DUSP19Q8WTR2 217 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 CDS1Q92903 461 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 TAAR8Q969N4 342 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 BPIFA2Q96DR5 249 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 MVB12AQ96EY5 273 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 S100A16Q96FQ6 103 aaKnown RBP2.7□□□□□ -1.98
NEDD4-208ENST00000508342 SLC25A44Q96H78 314 aaPredicted RBP2.7□□□□□ -1.98
NEDD4-208ENST00000508342 DHRS9Q9BPW9 319 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 INPP5KQ9BT40 448 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 CCDC106Q9BWC9 280 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 BTBD2Q9BX70 525 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 SLC22A4Q9H015 551 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 C8orf4Q9NR00 106 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 GLRX2Q9NS18 164 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 RLIMQ9NVW2 624 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 TESQ9UGI8 421 aaKnown RBP2.7□□□□□ -1.98
NEDD4-208ENST00000508342 TINAGQ9UJW2 476 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 PTBP2Q9UKA9 531 aaKnown RBP2.7□□□□□ -1.98
NEDD4-208ENST00000508342 FZR1Q9UM11 496 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 A0A096LPE4 126 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 A0A1W2PPZ6 126 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 LRIT2A6NDA9 550 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 ACOX3O15254 700 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 NDUFA2O43678 99 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 TBX19O60806 448 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 ADAM11O75078 769 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 TFPTP0C1Z6 253 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 OSMP13725 252 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 PRF1P14222 555 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 CPMP14384 443 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 NAGAP17050 411 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 ANXA7P20073 488 aaKnown RBP2.7□□□□□ -1.98
NEDD4-208ENST00000508342 PTNP21246 168 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 CRHBPP24387 322 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 HTR5AP47898 357 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 RRAS2P62070 204 aaPredicted RBP2.7□□□□□ -1.98
NEDD4-208ENST00000508342 BTG2P78543 158 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 MXD1Q05195 221 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 UBE2UQ5VVX9 321 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 SHFQ7M4L6 423 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 PARP8Q8N3A8 854 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 C17orf78Q8N4C9 275 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 OR2C3Q8N628 320 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 BVESQ8NE79 360 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 NFKBIDQ8NI38 313 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 ZBTB8AQ96BR9 441 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 WDR12Q9GZL7 423 aaKnown RBP2.7□□□□□ -1.98
NEDD4-208ENST00000508342 NMUR2Q9GZQ4 415 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 ACSS3Q9H6R3 686 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 EBF2Q9HAK2 575 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 HRASLSQ9HDD0 168 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 GALPQ9UBC7 116 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF346Q9UL40 294 aaKnown RBP2.7□□□□□ -1.98
NEDD4-208ENST00000508342 AMDHD2Q9Y303 409 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 NPIPA5A0A0B4J1W7 369 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 OR2AT4A6NND4 320 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 CLCA1A8K7I4 914 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 CXCR6O00574 342 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 EIF1BO60739 113 aaKnown RBP2.7□□□□□ -1.98
NEDD4-208ENST00000508342 NXPH2O95156 264 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 IFNA10P01566 189 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 IGLV3-25P01717 112 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 ADH4P08319 380 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 TBXA2RP21731 343 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 NFYBP25208 207 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 GRIA1P42261 906 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 MAGEA12P43365 314 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 CX3CR1P49238 355 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 NR1H2P55055 460 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 CLDN15P56746 228 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 PRDX1Q06830 199 aaKnown RBP2.7□□□□□ -1.98
NEDD4-208ENST00000508342 CEBPEQ15744 281 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 UGT3A2Q3SY77 523 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 NXNL2Q5VZ03 156 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 OR4F3Q6IEY1 312 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 TMEM65Q6PI78 240 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 DCDC5Q6ZRR9 648 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 NCCRP1Q6ZVX7 275 aaPredicted RBP2.7□□□□□ -1.98
NEDD4-208ENST00000508342 CREB3L2Q70SY1 520 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 OR52P1PQ8NH57 321 aa2.7□□□□□ -1.98
NEDD4-208ENST00000508342 GLYATL2Q8WU03 294 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms