RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 ZNF99A8MXY4 864 aaPredicted RBP9.04□□□□□ -0.96
HTT-204ENST00000508321 M0R3G1 203 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 TRMUO75648 421 aaKnown RBP9.04□□□□□ -0.96
HTT-204ENST00000508321 RENP00797 406 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 PEX2P28328 305 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 CRABP1P29762 137 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 HOXC12P31275 282 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 NTF4P34130 210 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 ZNF84P51523 738 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 CRISP1P54107 249 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 SRSF1Q07955 248 aaKnown RBP eCLIP9.04□□□□□ -0.96
HTT-204ENST00000508321 CD47Q08722 323 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 CAMK2DQ13557 499 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 OGFRL1Q5TC84 451 aaPredicted RBP9.04□□□□□ -0.96
HTT-204ENST00000508321 TSPO2Q5TGU0 170 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 ZNF627Q7L945 461 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 P2RY8Q86VZ1 359 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 ZNF610Q8N9Z0 462 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 HDAC2Q92769 488 aaKnown RBP9.04□□□□□ -0.96
HTT-204ENST00000508321 ZNF775Q96BV0 537 aaPredicted RBP9.04□□□□□ -0.96
HTT-204ENST00000508321 TXNDC15Q96J42 360 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 Q96M85 177 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 RBP7Q96R05 134 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 EMC6Q9BV81 110 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 ENKD1Q9H0I2 346 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 GPR35Q9HC97 309 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 OBP2BQ9NPH6 170 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 CMC2Q9NRP2 79 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 VSX1Q9NZR4 365 aaPredicted RBP9.04□□□□□ -0.96
HTT-204ENST00000508321 IL20RAQ9UHF4 553 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 PRSS50Q9UI38 385 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 TMEFF2Q9UIK5 374 aaPredicted RBP9.04□□□□□ -0.96
HTT-204ENST00000508321 IER3IP1Q9Y5U9 82 aa9.04□□□□□ -0.96
HTT-204ENST00000508321 SPTAN1Q13813 2472 aaKnown RBP9.04□□□□□ -0.96
HTT-204ENST00000508321 NKX2-6A6NCS4 301 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 ZAR1LA6NP61 321 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 C16orf97H3BN30 126 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 SOCS2O14508 198 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 ARHGEF9O43307 516 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 UPK3AO75631 287 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 ITGA5P08648 1049 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 HOXB1P14653 301 aaPredicted RBP9.03□□□□□ -0.96
HTT-204ENST00000508321 PAICSP22234 425 aaKnown RBP9.03□□□□□ -0.96
HTT-204ENST00000508321 IGHV1-2P23083 117 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 IL32P24001 234 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 POU1F1P28069 291 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 UGT2B10P36537 528 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 GIPRP48546 466 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 CENPAP49450 140 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 BLVRAP53004 296 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 CDK5Q00535 292 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 MYBPC1Q00872 1141 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 ROR2Q01974 943 aaKnown RBP9.03□□□□□ -0.96
HTT-204ENST00000508321 FAPQ12884 760 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 NPRL3Q12980 569 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 SFRP5Q5T4F7 317 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 CARD17Q5XLA6 110 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 KLHL24Q6TFL4 600 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 STAC2Q6ZMT1 411 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 DPPA2Q7Z7J5 298 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 CCDC36Q8IYA8 594 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 OR4Q3Q8NH05 313 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 NANOS1Q8WY41 292 aaKnown RBP9.03□□□□□ -0.96
HTT-204ENST00000508321 RASD2Q96D21 266 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 NMD3Q96D46 503 aaKnown RBP9.03□□□□□ -0.96
HTT-204ENST00000508321 PLEKHA8Q96JA3 519 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 RACGAP1Q9H0H5 632 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 FN3KQ9H479 309 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 CRLF2Q9HC73 371 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 SMPD3Q9NY59 655 aaPredicted RBP9.03□□□□□ -0.96
HTT-204ENST00000508321 ALPK2Q86TB3 2170 aa9.03□□□□□ -0.96
HTT-204ENST00000508321 SLC22A23A1A5C7 686 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 H0YJX3 145 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 SURF4O15260 269 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 DHHO43323 396 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 GOSR1O95249 250 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 FARS2O95363 451 aaKnown RBP9.02□□□□□ -0.97
HTT-204ENST00000508321 ATP6V1G2O95670 118 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 IGHV3-9P01782 118 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 QDPRP09417 244 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 HIST1H1CP16403 213 aaKnown RBP9.02□□□□□ -0.97
HTT-204ENST00000508321 IGFBP2P18065 325 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 NPR2P20594 1047 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 EDNRAP25101 427 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 CCKARP32238 428 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 GUCA1AP43080 201 aaPredicted RBP9.02□□□□□ -0.97
HTT-204ENST00000508321 SLC25A1P53007 311 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 RUNX1T1Q06455 604 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.02□□□□□ -0.97
HTT-204ENST00000508321 GINS1Q14691 196 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 PTGES3Q15185 160 aaKnown RBP9.02□□□□□ -0.97
HTT-204ENST00000508321 CDSNQ15517 529 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 CEACAM16Q2WEN9 425 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 TIMM23BQ5SRD1 257 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 SLX4IPQ5VYV7 408 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 LEG1Q6P5S2 330 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 ANKRD16Q6P6B7 361 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 FOXL2NBQ6ZUU3 175 aa9.02□□□□□ -0.97
HTT-204ENST00000508321 BHLHA15Q7RTS1 189 aaPredicted RBP9.02□□□□□ -0.97
HTT-204ENST00000508321 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms