RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 LINC00471Q8N535 108 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 MAGEE2Q8TD90 523 aaPredicted RBP15.89■□□□□ 0.13
NPHP4-210ENST00000506941 GNPDA2Q8TDQ7 276 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 MCHR2Q969V1 340 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 Q96M85 177 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 C1QTNF6Q9BXI9 259 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 OR52D1Q9H346 318 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 LIME1Q9H400 295 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 NRIP3Q9NQ35 241 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 ARPC4-TTLL3A0A0A6YYG9 625 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 IGKV1D-43A0A0B4J1Z2 117 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 TIPRLO75663 272 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 SLC2A10O95528 541 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 B4GALT1P15291 398 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 ZNF83P51522 516 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 ZNF133P52736 654 aaPredicted RBP15.88■□□□□ 0.13
NPHP4-210ENST00000506941 NR1H2P55055 460 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 MESTQ5EB52 335 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 FAM205BPQ63HN1 556 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 KLHL24Q6TFL4 600 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 ZNF813Q6ZN06 617 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 ZNF620Q6ZNG0 422 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 SSX8Q7RTT4 187 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 ARIH2OSQ8N7S6 290 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 AQP11Q8NBQ7 271 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 HTRA1Q92743 480 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 RASD2Q96D21 266 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 FOXB1Q99853 325 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 TMEM204Q9BSN7 226 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 NGBQ9NPG2 151 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 STX18Q9P2W9 335 aaKnown RBP15.88■□□□□ 0.13
NPHP4-210ENST00000506941 POFUT2Q9Y2G5 429 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 OTOGQ6ZRI0 2925 aa15.88■□□□□ 0.13
NPHP4-210ENST00000506941 TEX13CA0A0J9YWL9 993 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 A6NIZ1 184 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 H7C1C5 153 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 DHHO43323 396 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 CIB2O75838 187 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 RAP1BP61224 184 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 LCN6P62502 163 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 RAP1AP62834 184 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 CD47Q08722 323 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 C10orf128Q5T292 105 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 OR10G2Q8NGC3 310 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 SAMD8Q96LT4 415 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 ZNF570Q96NI8 536 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 ALG12Q9BV10 488 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 NDEL1Q9GZM8 345 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 ESRP2Q9H6T0 727 aaKnown RBP15.87■□□□□ 0.13
NPHP4-210ENST00000506941 EGLN3Q9H6Z9 239 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 YY1AP1Q9H869 796 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 NTN4Q9HB63 628 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 OBP2BQ9NPH6 170 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 ZNF224Q9NZL3 707 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 GRHPRQ9UBQ7 328 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 DNAJB9Q9UBS3 223 aa15.87■□□□□ 0.13
NPHP4-210ENST00000506941 MAP1AP78559 2803 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-210ENST00000506941 MYO9AB2RTY4 2548 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 M0R1B8 84 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 GNGT2O14610 69 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 PPP1R3DO95685 299 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 WNT11O96014 354 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 SDHAP31040 664 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 UBE2NP61088 152 aaKnown RBP15.86■□□□□ 0.13
NPHP4-210ENST00000506941 SPOCK1Q08629 439 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 KRR1Q13601 381 aaKnown RBP15.86■□□□□ 0.13
NPHP4-210ENST00000506941 GK3PQ14409 553 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 RFX4Q33E94 735 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 C1QTNF12Q5T7M4 302 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 SLC25A47Q6Q0C1 308 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 DPY19L2P2Q6ZN68 376 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 ZNF704Q6ZNC4 412 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-210ENST00000506941 HS3ST5Q8IZT8 346 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 GIPC3Q8TF64 312 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 GTPBP3Q969Y2 492 aaKnown RBP15.86■□□□□ 0.13
NPHP4-210ENST00000506941 DUS3LQ96G46 650 aaKnown RBP15.86■□□□□ 0.13
NPHP4-210ENST00000506941 DGCR6LQ9BY27 220 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 PLA2G12AQ9BZM1 189 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 NOX3Q9HBY0 568 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 TMEM38BQ9NVV0 291 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 UGT2A1Q9Y4X1 527 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 IER3IP1Q9Y5U9 82 aa15.86■□□□□ 0.13
NPHP4-210ENST00000506941 CCDC168Q8NDH2 2452 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 RTTNQ86VV8 2226 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 SOCS2O14508 198 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 IMPA2O14732 288 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 ARHGEF9O43307 516 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 TXNDC12O95881 172 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 TP53P04637 393 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-210ENST00000506941 CD3EP07766 207 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 IGFBP1P08833 259 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-210ENST00000506941 HOXB1P14653 301 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-210ENST00000506941 SLC6A6P31641 620 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 GPR139Q6DWJ6 353 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 KLHL17Q6TDP4 642 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 PTCHD4Q6ZW05 846 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 MYPOPQ86VE0 399 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-210ENST00000506941 KBTBD8Q8NFY9 601 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 OR8D4Q8NGM9 314 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 LILRB1Q8NHL6 650 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms