RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 PAGE2BQ5JRK9 111 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 RAET1LQ5VY80 246 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 HSDL2Q6YN16 418 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 ACOT7LQ6ZUV0 252 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 C17orf82Q86X59 251 aaPredicted RBP2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 PLA2G4DQ86XP0 818 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 NUDCD3Q8IVD9 361 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 GPR65Q8IYL9 337 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 SLC39A11Q8N1S5 342 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 MAPK1IP1LQ8NDC0 245 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 OR2L3Q8NG85 312 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 OR1L6Q8NGR2 347 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 FGGYQ96C11 551 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 HAVCR1Q96D42 359 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 B3GALT6Q96L58 329 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 C1orf147Q96MC9 270 aaPredicted RBP2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 CNN2Q99439 309 aaKnown RBP2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 MAPKAP1Q9BPZ7 522 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 CENPKQ9BS16 269 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 UBXN6Q9BZV1 441 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 PPA2Q9H2U2 334 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 RBKSQ9H477 322 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 CWH43Q9H720 699 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 ISG20L2Q9H9L3 353 aaKnown RBP2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 NMRAL1Q9HBL8 299 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 NEK6Q9HC98 313 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 ZNF302Q9NR11 478 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 RGS18Q9NS28 235 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 THUMPD1Q9NXG2 353 aaKnown RBP2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 PISDQ9UG56 409 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 PRG3Q9Y2Y8 225 aaPredicted RBP2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 RPL36Q9Y3U8 105 aaKnown RBP2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 FLVCR1Q9Y5Y0 555 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 PEX16Q9Y5Y5 336 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 CFAP54Q96N23 3096 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 ATG2AQ2TAZ0 1938 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 MICAL3Q7RTP6 2002 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 RIF1Q5UIP0 2472 aaKnown RBP2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 RAI1Q7Z5J4 1906 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 IGLV8-61A0A075B6I0 122 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 IGKV6D-21A0A0A0MT36 114 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 LRRIQ4A6NIV6 560 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 TMEM110-MUSTN1A8MSY1 372 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 SRRM5B3KS81 715 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 WWP2O00308 870 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 CDX4O14627 284 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 ABCD4O14678 606 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 SLC37A4O43826 429 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 ZNF354AO60765 605 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 TBL1XO60907 577 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 CST1P01037 141 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 KRT14P02533 472 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 CRYGBP07316 175 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 PABPC4LP0CB38 370 aaKnown RBP2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 IGLL1P15814 213 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 GDF1P27539 372 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 NTSP30990 170 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 DDOSTP39656 456 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 PTGDSP41222 190 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 SYKP43405 635 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 SLC11A1P49279 550 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 PLP1P60201 277 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 LMO4P61968 165 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 ENPEPQ07075 957 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 TGM3Q08188 693 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 GRB7Q14451 532 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 PRR4Q16378 134 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 Q1RN00 199 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 LRRC36Q1X8D7 754 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 CARD16Q5EG05 197 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 XKR7Q5GH72 579 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 OR2B11Q5JQS5 317 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 SAMD4BQ5PRF9 694 aaKnown RBP2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 ZNF658Q5TYW1 1059 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 MARC1Q5VT66 337 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 RNLSQ5VYX0 342 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 TWF2Q6IBS0 349 aaKnown RBP2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 OR52E8Q6IFG1 317 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 WDR74Q6RFH5 385 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 LRRC31Q6UY01 552 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 LRRC74BQ6ZQY2 392 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 FRA10AC1Q70Z53 315 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 PGAP1Q75T13 922 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 ARCQ7LC44 396 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 SKA3Q8IX90 412 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 GPR137CQ8N3F9 429 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 SDR9C7Q8NEX9 313 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 RHOXF1Q8NHV9 184 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 SETD7Q8WTS6 366 aaKnown RBP2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 UFD1Q92890 307 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 PGLYRP4Q96LB8 373 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 NOL4LQ96MY1 436 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 TSNARE1Q96NA8 513 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 SIGLEC12Q96PQ1 595 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 PANX2Q96RD6 677 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 TBX15Q96SF7 602 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 ATOH8Q96SQ7 321 aa2.45□□□□□ -2.02
TRAPPC11-205ENST00000506426 CHP1Q99653 195 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms